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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69845.1
DDBJ      :             inner membrane protein YgaP
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  123/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:175 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->69 2k0zA PDBj 2e-05 32.7 %
:RPS:PDB   2->104 3d1pA PDBj 1e-16 25.7 %
:RPS:SCOP  2->112 1yt8A1  c.46.1.2 * 3e-20 23.6 %
:HMM:SCOP  1->154 1yt8A3 c.46.1.2 * 6.8e-33 34.2 %
:RPS:PFM   21->98 PF00581 * Rhodanese 9e-06 35.9 %
:RPS:PFM   115->165 PF11127 * DUF2892 1e-08 49.0 %
:HMM:PFM   7->99 PF00581 * Rhodanese 1.6e-17 33.7 92/113  
:HMM:PFM   115->172 PF11127 * DUF2892 4.2e-13 37.7 53/66  
:BLT:SWISS 1->173 YGAP_ECOLI 3e-61 64.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69845.1 GT:GENE ACF69845.1 GT:PRODUCT inner membrane protein YgaP GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2920861..2921388 GB:FROM 2920861 GB:TO 2921388 GB:DIRECTION + GB:PRODUCT inner membrane protein YgaP GB:NOTE identified by match to protein family HMM PF00581 GB:PROTEIN_ID ACF69845.1 GB:DB_XREF GI:194409626 LENGTH 175 SQ:AASEQ MSIGIVSPREAQALIAQGAKLIDVRDADEYLREHIPHAQLAPLSRLEQGDLPANLRAEQIIFHCQSGKRTSSNAAKLQAIAAPAQVSLLEGGIDGWKAAGLPVTEDKSQPLPLMRQVQIAAGGLALLGVIMGYTVHGGFFLISGFVGAGLMLAGMTGFCGMARLLEKMPWNTRTH GT:EXON 1|1-175:0| BL:SWS:NREP 1 BL:SWS:REP 1->173|YGAP_ECOLI|3e-61|64.7|173/174| TM:NTM 2 TM:REGION 119->141| TM:REGION 145->167| SEG 74->84|aaklqaiaapa| BL:PDB:NREP 1 BL:PDB:REP 21->69|2k0zA|2e-05|32.7|49/110| RP:PDB:NREP 1 RP:PDB:REP 2->104|3d1pA|1e-16|25.7|101/118| RP:PFM:NREP 2 RP:PFM:REP 21->98|PF00581|9e-06|35.9|78/108|Rhodanese| RP:PFM:REP 115->165|PF11127|1e-08|49.0|51/67|DUF2892| HM:PFM:NREP 2 HM:PFM:REP 7->99|PF00581|1.6e-17|33.7|92/113|Rhodanese| HM:PFM:REP 115->172|PF11127|4.2e-13|37.7|53/66|DUF2892| RP:SCP:NREP 1 RP:SCP:REP 2->112|1yt8A1|3e-20|23.6|110/136|c.46.1.2| HM:SCP:REP 1->154|1yt8A3|6.8e-33|34.2|152/0|c.46.1.2|1/1|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 126 OP:NHOMOORG 123 OP:PATTERN -------------------------------------------------------------------- -1-----1111---------------------2111------------------------11----2-111-------------------------------------------------------------------------11111----1111------111-11---------------1-11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1111--------------121-1----------------------1---------------1-1----1-------------------1--------------------------------1---1---1---------------------------1--1-------1-------------------------------1---1-------------------------------------------------------1-------------------------------------1---11-1111111111-111111111111111111111111---1111111111111111-1111111----------------------------1------1-1--------1-----------1-----------------1-1-1-1------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 112 STR:RPRED 64.0 SQ:SECSTR TccEEccHHHHHHHHHTcTTEEEcccHHHHHHcccTTcEEccTTTcTTGGGccHHHHHHEEEEccccHHHHHHHHHHHHTTTcccEEEEcTTHHHHHHTTGGGcEccccccT############################################################### DISOP:02AL 1-1,172-176| PSIPRED ccccEEcHHHHHHHHHcccEEEEcccHHHHHHccccccEEccHHHccHHHccccccccEEEEEEcccHHHHHHHHHHHHHcccccEEEEcccHHHHHHccccEEccccccccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHcccccccc //