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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69863.1
DDBJ      :             inner membrane transport protein YnfM
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  308/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:417 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  17->414 1pw4A  f.38.1.1 * 1e-08 11.1 %
:HMM:SCOP  1->417 1pw4A_ f.38.1.1 * 5.6e-67 27.2 %
:RPS:PFM   55->258 PF07690 * MFS_1 1e-08 24.5 %
:HMM:PFM   41->268 PF07690 * MFS_1 4.5e-30 25.6 227/353  
:HMM:PFM   272->407 PF07690 * MFS_1 8.6e-13 30.1 136/353  
:BLT:SWISS 1->417 YNFM_ECOLI 0.0 83.5 %
:PROS 91->107|PS00216|SUGAR_TRANSPORT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69863.1 GT:GENE ACF69863.1 GT:PRODUCT inner membrane transport protein YnfM GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1609841..1611094) GB:FROM 1609841 GB:TO 1611094 GB:DIRECTION - GB:PRODUCT inner membrane transport protein YnfM GB:NOTE identified by match to protein family HMM PF07690 GB:PROTEIN_ID ACF69863.1 GB:DB_XREF GI:194409644 LENGTH 417 SQ:AASEQ MSRTTILDDATASDIDEQRHSQPVQFIKRGTAPFMRVTLALFSAGLATFALLYCVQPILPVLSQEFGVSPASSSVSLSISTAMLAIGLLFTGPLSDAIGRKPVMVTALLLASCCTLLSTMMTSWHGILIMRALIGLSLSGVAAVGMTYLSEEIHPSFVAFSMGLYISGNSIGGMSGRLLSGVMTDFFNWRIALAAIGCFALASALMFWKILPASQHFRPTSLRPKTLFINFRLHWRDRGLPLLFAEGFLLMGAFVTLFNYIGYRLMLSPWELSQAVVGLLSVAYLTGTWSSPKAGAMTSRYGRGPVMLFSTAVMLGGLLLTLFTSLWLIFAGMLLFSAGFFAAHSVASSWIGPRARRAKGQASSLYLFSYYLGSSIAGTLGGVFWHSYGWNGVGGFIALMLVLAILVGTRLHHRLHA GT:EXON 1|1-417:0| BL:SWS:NREP 1 BL:SWS:REP 1->417|YNFM_ECOLI|0.0|83.5|417/417| PROS 91->107|PS00216|SUGAR_TRANSPORT_1|PDOC00190| TM:NTM 10 TM:REGION 36->58| TM:REGION 74->96| TM:REGION 102->124| TM:REGION 127->149| TM:REGION 155->177| TM:REGION 191->213| TM:REGION 240->262| TM:REGION 267->288| TM:REGION 314->336| TM:REGION 390->412| SEG 69->80|spasssvslsis| SEG 106->119|talllascctllst| SEG 315->328|lggllltlftslwl| SEG 363->375|sslylfsyylgss| RP:PFM:NREP 1 RP:PFM:REP 55->258|PF07690|1e-08|24.5|204/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 41->268|PF07690|4.5e-30|25.6|227/353|MFS_1| HM:PFM:REP 272->407|PF07690|8.6e-13|30.1|136/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 17->414|1pw4A|1e-08|11.1|398/434|f.38.1.1| HM:SCP:REP 1->417|1pw4A_|5.6e-67|27.2|404/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 356 OP:NHOMOORG 314 OP:PATTERN -------------------------------------------------------------------- 111-11-1111121211--------1----------1111-------1----111111------1-1111------------------11---------------1--1---------------------------111--------------------------------------------1-1-----1-2-------------1---11-2--11-111--------21---------------1--11----------------------------------1---------------------------------------1-----------------------1----------------------1----------11-----1------112--1-111-11111111----1--1111111-----------------11111111111---------------------------------------1111--133231211111111111112111-1----111-------11---------21----------11-----1-----1----1-11----12211-------------------------1---1111----1-1111111111111111111111------111---112121111111111111-11111111111111111111211111121112122222121121--1---11-111-111-1111---------------111---------------22222111111-22122112112112111----------111111111111111111111111------1-------------------------------------------------------- ---------------11-------------------------------11------------------------------------------1-----------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2,8-30,216-227,416-418| PSIPRED ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //