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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF69925.1
DDBJ      :             anaerobic dimethyl sulfoxide reductase chain a
Swiss-Prot:YNFF_ECOLI   RecName: Full=Probable dimethyl sulfoxide reductase chain ynfF;         Short=DMSO reductase;         EC=1.8.99.-;Flags: Precursor;

Homologs  Archaea  47/68 : Bacteria  551/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
b.52.2c.81.1
:811 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   116->810 1cxsA PDBj 5e-61 33.5 %
:RPS:PDB   61->810 1dmsA PDBj e-147 28.1 %
:RPS:SCOP  61->675 1dmrA2  c.81.1.1 * e-110 26.3 %
:RPS:SCOP  680->810 1dmrA1  b.52.2.2 * 8e-44 35.4 %
:HMM:SCOP  57->692 1ti6A2 c.81.1.1 * 1.2e-174 38.3 %
:HMM:SCOP  679->811 1q16A1 b.52.2.2 * 1.2e-40 39.8 %
:RPS:PFM   118->521 PF00384 * Molybdopterin 1e-54 42.9 %
:RPS:PFM   716->802 PF01568 * Molydop_binding 7e-11 48.7 %
:HMM:PFM   118->569 PF00384 * Molybdopterin 8e-87 29.7 414/432  
:HMM:PFM   690->803 PF01568 * Molydop_binding 9e-29 35.8 106/109  
:HMM:PFM   56->115 PF04879 * Molybdop_Fe4S4 5.1e-16 32.7 55/55  
:BLT:SWISS 1->810 YNFF_ECOLI 0.0 91.9 %
:PROS 61->80|PS00551|MOLYBDOPTERIN_PROK_1
:PROS 726->753|PS00932|MOLYBDOPTERIN_PROK_3
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69925.1 GT:GENE ACF69925.1 GT:PRODUCT anaerobic dimethyl sulfoxide reductase chain a GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1621558..1623993) GB:FROM 1621558 GB:TO 1623993 GB:DIRECTION - GB:PRODUCT anaerobic dimethyl sulfoxide reductase chain a GB:NOTE identified by match to protein family HMM PF00384; match to protein family HMM PF01568; match to protein family HMM PF04879; match to protein family HMM TIGR01409; match to protein family HMM TIGR02166 GB:PROTEIN_ID ACF69925.1 GB:DB_XREF GI:194409706 LENGTH 811 SQ:AASEQ MKITNPEALMAASISRRSLVKTSAIGSLALASSAFTLPFSRIAHAAADLASGNVAEKAVWSSCTVNCGSRCLLRLHVKDDTVYWVESDTTGNDEYGNHQVRACLRGRSIRRRMNHPDRLKYPMKRVGKRGEGKFERISWDEALDTIGDNLKRILKDYGNEAVHVLYGTGVDGGNITNSNVPYRLMNACGGYLSRYGSYSTAQISAAMSYMFGGNDGNSPDDIANTKLVVMFGNNPAETRMSGGGVTYYVEQAHERSNARMIVIDPRYNDTAAGREDEWLPIRPGTDGALAAAIAWVLITEDLIDKPFLDKYCIGYDETTLPASAPRNAHYKAYILGQGEDGIAKTPQWAAQITSIPAEKIIQLAREIGSAKPAYICQGWGPQRHSNGEQTARAIAMLSVLTGNVGINGGNSGVREGTWDLGVEWFSMLENPVKTQISVFTWTDAIDHGAEMTATRDGVRGKDKLDVPIKFLWCYASNTLINQHGDIAHTHEVLQDDSKCEMIVGIEHFMTASAKYCDILLPDLMPTEQEDLISHESAGNMGYVILGQPATSPKFERKPIYWTLSEVAKRLGPDVYQTFTEGRTQHEWVKYLHAKTKARNPEMSDYEEMKQTGIFKKKCPEEHYVAFRAFREDPAANPLKTPSGKIEIYSERLATLANTWELKKDEIIHPLPAYTPGFDGWDDPLRQRYPLQLTGFHYKARTHSSYGNIDILQQACPQEIWINPIDAQARGIQHGDTVRVFNQNGEMLILAKVTPRILPGVTAIGQGAWLNADMFGDKIDRGGSINILTSHRPSPLAKGNPSHSNLVQVEKA GT:EXON 1|1-811:0| SW:ID YNFF_ECOLI SW:DE RecName: Full=Probable dimethyl sulfoxide reductase chain ynfF; Short=DMSO reductase; EC=1.8.99.-;Flags: Precursor; SW:GN Name=ynfF; OrderedLocusNames=b1588, JW5260; SW:KW 4Fe-4S; Cell membrane; Complete proteome; Iron; Iron-sulfur; Membrane;Metal-binding; Molybdenum; Oxidoreductase; Signal. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->810|YNFF_ECOLI|0.0|91.9|806/807| GO:SWS:NREP 7 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| PROS 61->80|PS00551|MOLYBDOPTERIN_PROK_1|PDOC00392| PROS 726->753|PS00932|MOLYBDOPTERIN_PROK_3|PDOC00392| SEG 23->34|saigslalassa| SEG 402->413|gnvginggnsgv| BL:PDB:NREP 1 BL:PDB:REP 116->810|1cxsA|5e-61|33.5|659/768| RP:PDB:NREP 1 RP:PDB:REP 61->810|1dmsA|e-147|28.1|709/766| RP:PFM:NREP 2 RP:PFM:REP 118->521|PF00384|1e-54|42.9|361/423|Molybdopterin| RP:PFM:REP 716->802|PF01568|7e-11|48.7|78/112|Molydop_binding| HM:PFM:NREP 3 HM:PFM:REP 118->569|PF00384|8e-87|29.7|414/432|Molybdopterin| HM:PFM:REP 690->803|PF01568|9e-29|35.8|106/109|Molydop_binding| HM:PFM:REP 56->115|PF04879|5.1e-16|32.7|55/55|Molybdop_Fe4S4| GO:PFM:NREP 3 GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00384|IPR006656| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01568|IPR006657| GO:PFM GO:0030151|"GO:molybdenum ion binding"|PF01568|IPR006657| RP:SCP:NREP 2 RP:SCP:REP 61->675|1dmrA2|e-110|26.3|575/623|c.81.1.1| RP:SCP:REP 680->810|1dmrA1|8e-44|35.4|130/156|b.52.2.2| HM:SCP:REP 57->692|1ti6A2|1.2e-174|38.3|606/728|c.81.1.1|1/1|Formate dehydrogenase/DMSO reductase, domains 1-3| HM:SCP:REP 679->811|1q16A1|1.2e-40|39.8|133/170|b.52.2.2|1/1|ADC-like| OP:NHOMO 2155 OP:NHOMOORG 609 OP:PATTERN ---1-121334333323-2321134113111-1-2----222--11433-----32233421111--- 2-322-11111--121111-18--251111125565324321111-1-2---1-31----3222--22511--------5UM121324-------------1---111-------------------2221-111222222---32211111111111-111-111-1111------------33121---3-52222212212221222244152212331--111111121-111111111111111--11----------------------------------------------------------------------134-1----------13---222-----A--21so2223-449---1---131---------165342-23836122222222221-4464464572--32232232244462--13243434336111111113---2313-----------------------------1-121-255234336244222233444343245344755-265335233224556542233213----------944-AC93485332227-3449625137547-427378212134-3-2111111128232--4211122-2--52665-6D877468AA4EA----831------75744419AA9973779-79988789998997999966875631999B699C99989C98A75448565--444455555555-------------3221233353212212-333-----1--111123123231233331333----------377A233337724511-1111---------5-22------------------------------------------1-------21- ------------------1111-------------------------------1--11----------------------------------------------------------------------------------------------------1----2------------------------3-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 774 STR:RPRED 95.4 SQ:SECSTR #####################################HHHHHHHHHHHHHHHHccTEEEEccEEEEEEETTEEEEEEETTEEEEEEEcTcEcTTccTTcccccTTHHHHHHHHHcTTcccccEEEHGGTTcccEEEccHHHHHHHHHHHHHHHHHHHcGGGEEccccccccccccccHHHHHHHHHHHTcccEEEcccccTTHHHHHHHHTccccccHHHHHHHccEEEEEcccHHHHTTccccccHHHHHHHHHHTcEEEEEcccccHHHHHHTcEEEcccTTcHHHHHHHHHHHHHHTTcccHHHHHHHEEcHHHHHcTTcTTcTcHHHHHHHTTcTTcccccHHHHHHHHcccHHHHHHHHHHHHHccEEEEEEccGGGccTTTHHHHHHHHHHHHHHTcTTcTTcEEEccTTccccccccccccccccccEEEGGGHHHHHHcTTcEEEcEEEETTEEEEcccccEEEEEcccHHHHHcccHHHHHHHGGHGGGccEEEEEEccccHHHHTccEEEEcccGGGccEEEEEcTTTcccEEEEEcccccccTTcccHHHHHHHHHHHTTcHcHHHHHTTccHHHHHHHHHHHHHHTTcccccHHHHHHHcEEEcccccGGccTTHHHHHcTTTcccccccccEEcccHHHHHHTcTTTcccTTTcccccccccccccTTcTTTccccEEEEccccccccTTcTTTcGGGGGTcccEEEEcHHHHHHTTccTTcEEEEEccccEEEEEEEEcTTccTTEEEccTTcccccccTTcTccccccGGGcccccccTTTccccTTccEEEEEEc DISOP:02AL 1-11| PSIPRED cccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEcccccccccccccEEEEEEccEEEEEEcccccccccccccccHHHHHHHHHHHHcccccccccEEEccccccccEEEccHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHcccccccHHHHHHccEEEEEcccHHHHcccccHHHHHHHHHHHccccEEEEEEccccHHHHHHccEEEccccccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHccccccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEccHHHHHccHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHccccEEEEEEEccccHHccccccHHHHHHHHHHHcccEEEEEccccccccHHccEEcccccccccccEEEcccccccEEEEEEccccccccccccHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHcccccccHHHHHccEEEEcccccccccccHHHHcccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccEEcccHHHHHccccEEEEcHHHHHHcccccccEEEEEcccEEEEEEEEEcccccccEEEEEcccccccccccccccccccccEEccccccccccccHHHEEEEEEEEc //