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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70118.1
DDBJ      :             inner membrane metabolite transport protein YdfJ
Swiss-Prot:             

Homologs  Archaea  21/68 : Bacteria  507/915 : Eukaryota  57/199 : Viruses  1/175   --->[See Alignment]
f.38.1
:446 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   58->205 2d33D PDBj 4e-09 11.3 %
:RPS:SCOP  1->410 1pw4A  f.38.1.1 * 2e-11 16.2 %
:HMM:SCOP  1->423 1pw4A_ f.38.1.1 * 8.1e-60 26.5 %
:RPS:PFM   54->203 PF00083 * Sugar_tr 1e-14 41.5 %
:HMM:PFM   274->426 PF07690 * MFS_1 5.3e-15 23.3 146/353  
:HMM:PFM   49->215 PF00083 * Sugar_tr 2.3e-26 28.2 156/451  
:BLT:SWISS 16->431 YDFJ_ECOLI 0.0 84.7 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70118.1 GT:GENE ACF70118.1 GT:PRODUCT inner membrane metabolite transport protein YdfJ GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1631725..1633065 GB:FROM 1631725 GB:TO 1633065 GB:DIRECTION + GB:PRODUCT inner membrane metabolite transport protein YdfJ GB:NOTE identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00883 GB:PROTEIN_ID ACF70118.1 GB:DB_XREF GI:194409899 LENGTH 446 SQ:AASEQ MRAAVSGWLGTALEFMDFQLYSLGAALVFHEIFFPEQSAAMALILAMGTYGAGYIARIIGAFVFGKMGDRIGRKKVLFITITMMGICTTLIGVLPTYAQIGIFAPVLLVTLRIIQGLGAGAEISGAGTMLAEYAPKGKRGIISSLVAMGTNCGTLSATAIWAVMFFALEREQLIAWGWRIPFLASVVVMIFAIWLRMNLKESPVFEKVSEGEKSPALTPASENTLGAMFTSKSFWLATGLRFGQAGNSGLIQTFLAGYLVQTLLFNKSIPTDALMISSVIGFITIPLLGWLSDKYGRRLPYIILNISAIILAWPMLSIVVDKTYSPGVIMAALIVIHNFAVLGLFALENITMAEIFGSRNRFTRMAISKEAGGLVAVGFGPVLAGIFCNMTDSWLPILIMLVLYSCIGLISALLMPEVRDRDLSLPEDAAEATAAEKLRHSATQTS GT:EXON 1|1-446:0| BL:SWS:NREP 1 BL:SWS:REP 16->431|YDFJ_ECOLI|0.0|84.7|412/427| TM:NTM 11 TM:REGION 21->43| TM:REGION 76->98| TM:REGION 100->122| TM:REGION 143->165| TM:REGION 178->200| TM:REGION 243->265| TM:REGION 272->294| TM:REGION 299->321| TM:REGION 331->353| TM:REGION 370->392| TM:REGION 395->417| RP:PDB:NREP 1 RP:PDB:REP 58->205|2d33D|4e-09|11.3|133/499| RP:PFM:NREP 1 RP:PFM:REP 54->203|PF00083|1e-14|41.5|135/433|Sugar_tr| HM:PFM:NREP 2 HM:PFM:REP 274->426|PF07690|5.3e-15|23.3|146/353|MFS_1| HM:PFM:REP 49->215|PF00083|2.3e-26|28.2|156/451|Sugar_tr| GO:PFM:NREP 4 GO:PFM GO:0005215|"GO:transporter activity"|PF00083|IPR005828| GO:PFM GO:0006810|"GO:transport"|PF00083|IPR005828| GO:PFM GO:0016021|"GO:integral to membrane"|PF00083|IPR005828| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00083|IPR005828| RP:SCP:NREP 1 RP:SCP:REP 1->410|1pw4A|2e-11|16.2|388/434|f.38.1.1| HM:SCP:REP 1->423|1pw4A_|8.1e-60|26.5|393/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 3229 OP:NHOMOORG 586 OP:PATTERN ------599ABB99B4-7233221-------------------------------------2361--- -1212328AAE-3154422-27--2V2222225999DNqp-1224-2--551QJM727-----438S87312222222-13-B-1122--------1--1-2---2-212-----------------1-1---1-------11111--------------131---1-----1-----1-----1------112444444433444433--22-1445-232-1-------111111111111111113-112----33-3-----1112---221------1--------------------------------------------------------111--------------22-------1-------1--44461442452G551-33323266566565647-66B55J7D231-677732454545E4-----6-----1-32333333444221-144233444112256AC86G5676673233-1564-73347aQRYTXCGIIDYYiULNLJDIcJfENGB-5HEB32722911-A437---1142-------11--1-1--1----21--------------111112-----1-5455341-1211211-------1-1---------------2-------1-1----1---------9878287677A788866-777678867778877677899866-12A9999AAAA989A999A45754551-444444344443----11111575711-11---1---22211--1DDDBE7A1226-AAC9DFE91GHIH1B9B955449555----------1----55545444441111---------------------------------------------------------1- ------------11--111--111111-------------------1------------111212----1--1-3--------16----111112311-11--222--6--------------------------------------------------112-4-3-1--------11-----1---111--2323331 --------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------- STR:NPRED 133 STR:RPRED 29.8 SQ:SECSTR #########################################################TcccGGGcTTcccccTTccccccHHHHHHHHHHHHHcccHHHHTTc########cEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcccEEEEEEEE#######ccTTcTTcccHHHHHHHHHHHHHHHHcccccc################################################################################################################################################################################################################################################# DISOP:02AL 205-222,435-447| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHccccccccHHHccHHHHHcccccccccccccc //