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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70132.1
DDBJ      :             type III secretion apparatus lipoprotein, YscJ/HrcJ family
Swiss-Prot:PRGK_SALTY   RecName: Full=Lipoprotein prgK;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  125/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:252 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->191 1yj7D PDBj 7e-12 28.8 %
:RPS:PFM   10->186 PF01514 * YscJ_FliF 8e-14 31.8 %
:HMM:PFM   5->192 PF01514 * YscJ_FliF 9.1e-62 37.1 186/207  
:HMM:PFM   210->249 PF05423 * Mycobact_memb 0.00085 30.0 40/140  
:BLT:SWISS 1->252 PRGK_SALTY e-143 100.0 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70132.1 GT:GENE ACF70132.1 GT:PRODUCT type III secretion apparatus lipoprotein, YscJ/HrcJ family GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2989510..2990268) GB:FROM 2989510 GB:TO 2990268 GB:DIRECTION - GB:PRODUCT type III secretion apparatus lipoprotein, YscJ/HrcJ family GB:NOTE identified by match to protein family HMM PF01514; match to protein family HMM TIGR02544 GB:PROTEIN_ID ACF70132.1 GB:DB_XREF GI:194409913 LENGTH 252 SQ:AASEQ MIRRYLYTFLLVMTLAGCKDKDLLKGLDQEQANEVIAVLQMHNIEANKIDSGKLGYSITVAEPDFTAAVYWIKTYQLPPRPRVEIAQMFPADSLVSSPRAEKARLYSAIEQRLEQSLQTMEGVLSARVHISYDIDAGENGRPPKPVHLSALAVYERGSPLAHQISDIKRFLKNSFADVDYDNISVVLSERSDAQLQAPGTPVKRNSFATSWIVLIILLSVMSAGFGVWYYKNHYARNKKGITADDKAKSSNE GT:EXON 1|1-252:0| SW:ID PRGK_SALTY SW:DE RecName: Full=Lipoprotein prgK;Flags: Precursor; SW:GN Name=prgK; OrderedLocusNames=STM2871; SW:KW Cell membrane; Cell outer membrane; Complete proteome; Lipoprotein;Membrane; Palmitate; Protein transport; Signal; Transmembrane;Transport; Virulence. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->252|PRGK_SALTY|e-143|100.0|252/252| GO:SWS:NREP 7 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0009279|"GO:cell outer membrane"|Cell outer membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0015031|"GO:protein transport"|Protein transport| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| GO:SWS GO:0009405|"GO:pathogenesis"|Virulence| TM:NTM 1 TM:REGION 206->227| BL:PDB:NREP 1 BL:PDB:REP 21->191|1yj7D|7e-12|28.8|153/158| RP:PFM:NREP 1 RP:PFM:REP 10->186|PF01514|8e-14|31.8|173/206|YscJ_FliF| HM:PFM:NREP 2 HM:PFM:REP 5->192|PF01514|9.1e-62|37.1|186/207|YscJ_FliF| HM:PFM:REP 210->249|PF05423|0.00085|30.0|40/140|Mycobact_memb| OP:NHOMO 174 OP:NHOMOORG 125 OP:PATTERN -------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------1111111111----1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------11--1---112------------------------------------------------------------------------111-2111221111-111-3333-2-111-------1--1---------------2-------------------------1112-----------1-1-------------------------------1----------1-1-------------------------------11-2-22-----1--2--1-1-1-12-1---------111112222222222222222--111--13-221222122121--2------------2-----------------------------11-1---11-----121-------------------11-----11111111--------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 165 STR:RPRED 65.5 SQ:SECSTR ####################EEEEEEEcHHHHHHHHHHHHHTTccEEEEEcTTccEEEEEcGGGHHHHHHHHHHTTccccccccHHHHcc######cHHHHHHHHHHHHHHHHHHHHTTcTTEEEEEEEEEccEEEEEEEEcTTccEEEEEEEEcTTcccGGGHHHHHHHHHHHcTTccGGGEEEEEEETT############################################################# DISOP:02AL 1-1,135-147,242-253| PSIPRED ccHHHHHHHHHHHHHHccccEEccccccHHHHHHHHHHHHHcccccEEEEEccccEEEEEcHHHHHHHHHHHHHccccccccccHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHEEEEEEEccccccccccccccEEEEEEEEcccccHHHHHHHHHHHHHHHcccccHHHEEEEEEccHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccccccccccccc //