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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70201.1
DDBJ      :             diguanylate cyclase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  571/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
b.1.18c.1.33d.58.29
:729 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   487->720 3ii8B PDBj 2e-19 33.3 %
:RPS:PDB   303->421 3btaA PDBj 1e-11 5.0 %
:RPS:PDB   492->719 2basA PDBj 1e-41 22.8 %
:RPS:SCOP  331->415 1w25A3  d.58.29.2 * 6e-08 16.5 %
:RPS:SCOP  388->454 1ea9C1  b.1.18.2 * 2e-04 14.9 %
:RPS:SCOP  492->726 2basA1  c.1.33.1 * 4e-44 24.6 %
:HMM:SCOP  331->442 1w25A3 d.58.29.2 * 3.3e-07 25.9 %
:HMM:SCOP  492->728 2basA1 c.1.33.1 * 1.3e-63 43.6 %
:RPS:PFM   329->415 PF00990 * GGDEF 9e-06 32.2 %
:RPS:PFM   494->724 PF00563 * EAL 1e-43 40.3 %
:HMM:PFM   15->315 PF05231 * MASE1 6e-62 24.3 292/299  
:HMM:PFM   493->724 PF00563 * EAL 2e-58 34.6 228/236  
:HMM:PFM   326->443 PF00990 * GGDEF 1.8e-07 28.0 118/161  
:BLT:SWISS 6->727 YFEA_ECOLI 0.0 69.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70201.1 GT:GENE ACF70201.1 GT:PRODUCT diguanylate cyclase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2584361..2586550) GB:FROM 2584361 GB:TO 2586550 GB:DIRECTION - GB:PRODUCT diguanylate cyclase GB:NOTE identified by match to protein family HMM PF00563; match to protein family HMM PF05231 GB:PROTEIN_ID ACF70201.1 GB:DB_XREF GI:194409982 LENGTH 729 SQ:AASEQ MPDKCNVLKNIKIFLLAFCLTVPAILLSRLISPRATIDSSYIFLAWLPLCVMFSVLFLFGRRGVAPMVGGMMLTNEWNFHLPLPQAMVLLFCQTFPVLLVCAIVRWQLGARWRYGIPNQGIWLRVFWLGLMTPFGIKISMHLAGHYLAFPVTISTFFGTGTAIFSIVDLLSLISAALIFTLFFYYPLRMIVSPHYIRIFWRRDVAPYLAKEKRLFTLLWFATLATLLAVLCTPFETKYIAGYLVPVLFIGFTIGVGKISYPLLNFSWALTALFLLSYNRNFLQGVGSEYSLAFILSVLISFSICLLYMARINQRSEWLNRQWHSQALTDPLTQLPNLRALEQFLLQDAGQSVCYLRMENLEFLSRHYGMQMRVHCEREVFRVLQPLLLEKEKIFHLPGSELLLVLTGPETEARLQYMLNVLNNRKIYWNNTGLDMEYGASWGTFDGRQETLQPLLGQLSWLAEQSCSHRRVLALTQSIEAASGQTTERVLRLQKIRQALERGALVLYAQPIRDAQGKGYDEILTRLRCDDGIMMPNQFIPLIAQFNLSVRFDMQVMEALLQWLSAHPSAEQGARFSVNLMPLTLLQKETASRIMQLFKRYGVPPASVIIEITEEQAFSHSEISMHNINQLRKFGLKIAIDDFGTGYANYERLKRLKADIIKIDGCFVKDILTDSLDAMIVKSITDLAKAKSLSVVAEFVETPAQRDLLLQLGVHSLQGYLIGRPRPLGK GT:EXON 1|1-729:0| BL:SWS:NREP 1 BL:SWS:REP 6->727|YFEA_ECOLI|0.0|69.4|722/729| TM:NTM 9 TM:REGION 8->30| TM:REGION 36->58| TM:REGION 84->106| TM:REGION 118->140| TM:REGION 157->179| TM:REGION 214->236| TM:REGION 238->260| TM:REGION 263->285| TM:REGION 289->311| SEG 214->230|lftllwfatlatllavl| BL:PDB:NREP 1 BL:PDB:REP 487->720|3ii8B|2e-19|33.3|231/256| RP:PDB:NREP 2 RP:PDB:REP 303->421|3btaA|1e-11|5.0|119/1277| RP:PDB:REP 492->719|2basA|1e-41|22.8|219/393| RP:PFM:NREP 2 RP:PFM:REP 329->415|PF00990|9e-06|32.2|87/160|GGDEF| RP:PFM:REP 494->724|PF00563|1e-43|40.3|231/236|EAL| HM:PFM:NREP 3 HM:PFM:REP 15->315|PF05231|6e-62|24.3|292/299|MASE1| HM:PFM:REP 493->724|PF00563|2e-58|34.6|228/236|EAL| HM:PFM:REP 326->443|PF00990|1.8e-07|28.0|118/161|GGDEF| RP:SCP:NREP 3 RP:SCP:REP 331->415|1w25A3|6e-08|16.5|85/162|d.58.29.2| RP:SCP:REP 388->454|1ea9C1|2e-04|14.9|67/121|b.1.18.2| RP:SCP:REP 492->726|2basA1|4e-44|24.6|228/257|c.1.33.1| HM:SCP:REP 331->442|1w25A3|3.3e-07|25.9|112/0|d.58.29.2|1/1|Nucleotide cyclase| HM:SCP:REP 492->728|2basA1|1.3e-63|43.6|234/0|c.1.33.1|1/1|EAL domain-like| OP:NHOMO 5245 OP:NHOMOORG 578 OP:PATTERN -------------------------------------------------------------------- 71-47---111----3322-2922-122222-44442422989FY-------447-----762-5294442----1----A1568D67--------------------1---------------------------33333---33VKEECC11-99---3--8E5-77B2------------B-41----67-666664562666666-1--1166654381CA11111166--------------------------2---------------------------------------------------------------4444911111115161J664343511--3675143521---211113---52269941111124PHH657HDBEJ44554553546-KHGGG6CN8I3-GEEFLNJMNNECE79972917A55772--------C994-P7G--------11111111111111111-----8A87397712C9A9BC85554BBJN777756BDN7CAL--GGCLAJAAJ14U54FFIHGNTLD-------76BKQS13623478567AAA-767D682F9----21-2A553----------------FBGMD43KD8OOJRIRKXRSRRTLQIPPONKMJHMKN---CKAP------CE733F6DDDCDCEECC-BDCEDCADCDBDCBCCCDEGHE76---B77BABABBBAABABA798566A71-844444423444---E-1-1-BBBAB2aBJ---------------4444413-1-AMKLNJLRLMOKLKLHLMN-----2---J5FDCGGGGGLNLRPCCEEFEEBBE2222--I-884256111111112-4-------------------------1-111-1------ --------------------------------------------------------------------------------------------------------------------------------------------------------------1----4-1-------7-----------1--6-----3---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 445 STR:RPRED 61.0 SQ:SECSTR ###########################################################################################################################################################################################################################################################################################EEEEEcccGGGTcccHHHHccccccccccccTTTTccHHHHHHHHHHHHHHHHHHHTcHHHHHHcccccHHHHHTTEEEccGGGcccGGGGEEEcccccccccHHHHHHcTTTHHHHHHHHHHHHccEEEEEcccHEETTTccHHHHHHTccccccccGGGGGGccccHHHHHHHHHHHHHHHTccccEEcccccccGGGcHHHHHHcccHHHHHHTTTTEEEEEEEEEEccccEEHEEEEEEEETTEEEcHHHHccccccHHHHHHHHHHHHHHHHHHHTTccTTcHHcEEEEccHHHHGGTTHHHHHHHHHHHHTTccGGGEEEEEccTTccccHHHHHHHHHHHHTTTcEEEEEEETTTcccHHHHHHHcccEEEEEcTTTcccTHHTHHHHHHHHHHHHHHHHTcEEEEEccccHHHHHHHHHTTEEEEccTTTcccccTT# DISOP:02AL 1-2,728-730| PSIPRED cccccHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccEEcccccHHHHHHHHHHHHcccccEEEEEEEEHHHHcccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHccccccccEEEEEEEEEHHHccccHHEEEEEHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHccccEEEEEEcccHHHHHHHccHHHHHHHHHHHHHHHHHHcccccEEEEEcccEEEEEEccccHHHHHHHHHHHHHHccccEEcccEEEEEEEEEEEEccccccHHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEEEcccccEEEEEEEEcccccEEcHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHccccHHHHHHHHHHHccccHHHEEEEEEHHHHHccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEcHHHHccccccHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHHcccEEEEccccccccccc //