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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70260.1
DDBJ      :             putative response regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  23/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.6
:247 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   12->62 2d1vA PDBj 4e-04 19.6 %
:RPS:SCOP  11->100 2fezA1  a.4.6.1 * 3e-08 18.9 %
:HMM:SCOP  5->99 1p2fA1 a.4.6.1 * 3.2e-08 27.2 %
:HMM:PFM   25->96 PF00486 * Trans_reg_C 2.1e-05 25.4 71/77  
:HMM:PFM   145->185 PF09578 * Spore_YabQ 2.5e-05 24.4 41/80  
:BLT:SWISS 21->83 YGEH_ECOLI 3e-04 39.3 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70260.1 GT:GENE ACF70260.1 GT:PRODUCT putative response regulator GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 435911..436654 GB:FROM 435911 GB:TO 436654 GB:DIRECTION + GB:PRODUCT putative response regulator GB:NOTE identified by match to protein family HMM PF00486 GB:PROTEIN_ID ACF70260.1 GB:DB_XREF GI:194410041 LENGTH 247 SQ:AASEQ MSQNNYLIDKRVILDCERMTLSCAGESITISESERSLLIAFYEGLFKKDDLINYVWGRKGVVVSDASYYKLINQLRGSFDKIGLKGASVVTRPRVGVLLSVSIEPLSDEAQNTPLPAVAETELSTVEVRRDDTIIPPIPGAVNKKDWLYFCLAALLMFFMMYKVKGENIDYFTLQGSYDGYTFYSVGHDKTHLTDIVEAYSEMSNEIHKQNGKIIYYIRVPNTNIFVQCLNQLDIAEPKCISIKERY GT:EXON 1|1-247:0| BL:SWS:NREP 1 BL:SWS:REP 21->83|YGEH_ECOLI|3e-04|39.3|61/100| TM:NTM 1 TM:REGION 146->163| RP:PDB:NREP 1 RP:PDB:REP 12->62|2d1vA|4e-04|19.6|51/103| HM:PFM:NREP 2 HM:PFM:REP 25->96|PF00486|2.1e-05|25.4|71/77|Trans_reg_C| HM:PFM:REP 145->185|PF09578|2.5e-05|24.4|41/80|Spore_YabQ| RP:SCP:NREP 1 RP:SCP:REP 11->100|2fezA1|3e-08|18.9|90/95|a.4.6.1| HM:SCP:REP 5->99|1p2fA1|3.2e-08|27.2|92/0|a.4.6.1|1/1|C-terminal effector domain of the bipartite response regulators| OP:NHOMO 39 OP:NHOMOORG 23 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----1112-2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-12222222222222----------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 51 STR:RPRED 20.6 SQ:SECSTR ###########EEEETTTTEEEETTEEccccHHHHHHHHHHHHccccHHHHHHHHHcTTccc######################################################################################################################################################################################### DISOP:02AL 1-1,111-111,113-119,123-123| PSIPRED ccccEEEEcccEEEEccccEEEccccEEEEcccHHHHHHHHHcccccHHHHHHHHcccccEEEcccHHHHHHHHHHHHHHccccccEEEEEEccEEEEEEEEEEEEcccccccccccccccccccEEcccccEEEcccccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEcccccEEEEEEccccEEHHHHHHHHHHHHHHHHHccccEEEEEEccccEEEEEEcccHHcccccEEEEEEcc //