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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70327.1
DDBJ      :             phenazine biosynthesis PhzC/PhzF protein
Swiss-Prot:YDDE_SALTY   RecName: Full=Uncharacterized isomerase yddE;         EC=5.1.-.-;

Homologs  Archaea  12/68 : Bacteria  365/915 : Eukaryota  81/199 : Viruses  0/175   --->[See Alignment]
d.21.1
:297 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->295 1qyaB PDBj e-144 81.7 %
:RPS:PDB   4->295 3ednA PDBj 1e-46 27.3 %
:RPS:SCOP  1->295 1s7jA  d.21.1.2 * 9e-59 31.7 %
:HMM:SCOP  1->295 1s7jA_ d.21.1.2 * 1.3e-63 39.3 %
:RPS:PFM   8->291 PF02567 * PhzC-PhzF 9e-43 44.6 %
:HMM:PFM   8->290 PF02567 * PhzC-PhzF 1.5e-82 39.1 274/282  
:BLT:SWISS 1->297 YDDE_SALTY e-173 99.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70327.1 GT:GENE ACF70327.1 GT:PRODUCT phenazine biosynthesis PhzC/PhzF protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1716294..1717187 GB:FROM 1716294 GB:TO 1717187 GB:DIRECTION + GB:PRODUCT phenazine biosynthesis PhzC/PhzF protein GB:NOTE identified by match to protein family HMM PF02567; match to protein family HMM TIGR00654 GB:PROTEIN_ID ACF70327.1 GB:DB_XREF GI:194410108 LENGTH 297 SQ:AASEQ MKPQIYHVDAFTSEPFRGNSAGVVLHADTLSDAQMQLIARELRHSETAFLLKSEESDVRIRYFTPTVEVPICGHATVAAHYVRATVLGLGNTTVWQTSLAGRHRVEIHAEHNDYRITLEQGQPSFEPPLVGEIRAAIITALNLTEDDIVPGAPIQVASTGHAKVMILLKPDVDIDALSPNLAALTAISQQIGCNGFFPFQIRPGKNETDGRMFSPAIGIVEDPVTGNANGPMGAWLVHHGLMAHDGKTLQIQGHQGRALGKEGTVDVTVTIRDNQPENVTISGQAVILFHAEWAITF GT:EXON 1|1-297:0| SW:ID YDDE_SALTY SW:DE RecName: Full=Uncharacterized isomerase yddE; EC=5.1.-.-; SW:GN Name=yddE; OrderedLocusNames=STM1581; SW:KW Complete proteome; Isomerase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->297|YDDE_SALTY|e-173|99.3|297/297| GO:SWS:NREP 1 GO:SWS GO:0016853|"GO:isomerase activity"|Isomerase| BL:PDB:NREP 1 BL:PDB:REP 1->295|1qyaB|e-144|81.7|295/307| RP:PDB:NREP 1 RP:PDB:REP 4->295|3ednA|1e-46|27.3|282/289| RP:PFM:NREP 1 RP:PFM:REP 8->291|PF02567|9e-43|44.6|269/274|PhzC-PhzF| HM:PFM:NREP 1 HM:PFM:REP 8->290|PF02567|1.5e-82|39.1|274/282|PhzC-PhzF| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF02567|IPR003719| GO:PFM GO:0009058|"GO:biosynthetic process"|PF02567|IPR003719| RP:SCP:NREP 1 RP:SCP:REP 1->295|1s7jA|9e-59|31.7|259/260|d.21.1.2| HM:SCP:REP 1->295|1s7jA_|1.3e-63|39.3|257/260|d.21.1.2|1/1|Diaminopimelate epimerase-like| OP:NHOMO 640 OP:NHOMOORG 458 OP:PATTERN ------------------------22211111-----------1-1----1---------1------- 1-1-21--111-------------11-----1-----111--111-------11-1-1--231-2-31211----------1-------------------3--11111-------------------------1--11-----3-11111111111----1-111-1111------------11111---1-1222222231212221222211221-------11111-12--------------------2------------------------1-1-------------------------------------------12114432224-1--211-----11-------11-----2----11-111-21111-------111---11---111111--111-111111121-1-111-2122222221112111-----1211111111111--111------------------------------11112211113441321----22-1-----14112111--11111---311-1---1----2---------------------1----------------1111-------1-----------------------22-1112--1-13---1------------1-------------1111-111111111111-1111111111111--1--2121111121-111111111111111--1---11-1--------------1-----3222-13-2--------------133323211111-66661311111121211----------1--------111111233233-11-------1----11------------------------------------11-11------11 ------------111-----------------------------------1---111------11--1--1-1-1211111---11-1--------111-1------11242-1-311111-1121121452-111-1-11-11---1--111--111-11----1-----4414--------113211-22--112-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 295 STR:RPRED 99.3 SQ:SECSTR HHHEEEEEEEccEccTTcEEEEEEcccTTcccHHHHHHHHHHccccEEEEEcccTccccEEEEEccccEcccHHHHHHHHHHHHTTccccccEEEEEETTEEEEEEEEEcTTccEEEEEccccEEEEccccHccHHHHHHTTccGGGccTTcccEEEEcccEEEEEEccTcHHHHHHcccGGGHHHHccccTTcEEEEEEcccccTTcccEEccTTccccEEcccHHHHHHHHHHHHHTccccccccEEEEEEEEcGGGTccEEEEEEEEccTTcccEEEEEEcEEEEEEEEEEc## DISOP:02AL 1-1| PSIPRED ccEEEEEEEEEccccccccEEEEEEccccccHHHHHHHHHHccccEEEEEEEcccccEEEEEEcccccccccccHHHHHHHHHHHHccccccEEEEEEccEEEEEEEEEEcccEEEEEEccccccccccccccHHHHHHHHcccHHHHccccEEEEEEccccEEEEEEccHHHHHHccccHHHHHHHHHHccccEEEEEEEcccccEEEEEEEccccccccccccHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEcccEEEEEEEEEccccccEEEEEccEEEEEEEEEEEEc //