[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70398.1
DDBJ      :             putative metabolite transport protein YjhB
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  564/915 : Eukaryota  127/199 : Viruses  1/175   --->[See Alignment]
f.38.1
:426 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   76->198 2d33D PDBj 3e-09 7.3 %
:RPS:SCOP  13->343 1pw4A  f.38.1.1 * 4e-14 9.8 %
:HMM:SCOP  9->425 1pw4A_ f.38.1.1 * 6.3e-73 26.9 %
:RPS:PFM   25->308 PF07690 * MFS_1 1e-19 28.6 %
:HMM:PFM   20->408 PF00083 * Sugar_tr 5.6e-40 21.9 384/451  
:BLT:SWISS 8->413 YJHB_ECOLI e-132 56.1 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70398.1 GT:GENE ACF70398.1 GT:PRODUCT putative metabolite transport protein YjhB GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1226357..1227637 GB:FROM 1226357 GB:TO 1227637 GB:DIRECTION + GB:PRODUCT putative metabolite transport protein YjhB GB:NOTE identified by match to protein family HMM PF00083; match to protein family HMM PF07690 GB:PROTEIN_ID ACF70398.1 GB:DB_XREF GI:194410179 LENGTH 426 SQ:AASEQ MIAKFFPWYSEITRPQKNALFSAWLGYVFDGFDFMLIFYIMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIYIRARAPESKEWEEAKLSGPGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAGEGFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVAFWTATILLIIGLSIPDRLKARRESFQSTKEF GT:EXON 1|1-426:0| BL:SWS:NREP 1 BL:SWS:REP 8->413|YJHB_ECOLI|e-132|56.1|394/405| TM:NTM 11 TM:REGION 23->45| TM:REGION 56->78| TM:REGION 92->114| TM:REGION 143->165| TM:REGION 168->189| TM:REGION 233->255| TM:REGION 269->291| TM:REGION 298->320| TM:REGION 322->344| TM:REGION 356->378| TM:REGION 383->405| RP:PDB:NREP 1 RP:PDB:REP 76->198|2d33D|3e-09|7.3|123/499| RP:PFM:NREP 1 RP:PFM:REP 25->308|PF07690|1e-19|28.6|276/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 20->408|PF00083|5.6e-40|21.9|384/451|Sugar_tr| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 13->343|1pw4A|4e-14|9.8|326/434|f.38.1.1| HM:SCP:REP 9->425|1pw4A_|6.3e-73|26.9|412/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 3482 OP:NHOMOORG 722 OP:PATTERN ------7889AA78AB12333112---------111-----------1------111--1-B961--- 3581131877D16343422-24--1N22222236666Gam-1-22-31-21-MHM534----1823J77213111344-13-9-2122--1--1--1----1-1-2-5-7-----------------------------------1---------11---12----1--1--1-----1----12-----1917777777864778887-1553467A12552211111114223333333333333341224-1214513122111145312432---11111111-------1-----111111111--11---------1---12-----------144--------------A813---1-1---------1733713213-2H121-222-2-44344344424-34E32H6F-42-666411153411A513---5----1--64666666733212-111111222----34334373332231-1--2483-41118VUVYVVDDGGDYYkSIKIHBIfDlBNI9-2JGC316--82--A626---1-34----------2--11--1--121----12221--1--112221-----1-332432-1--1---------11---3-2--11-1-----13111-1-21-11---1---------75562557999878776-978778968797B88788B8A845-239677999AB867A778D54745542-333334233332--1-232334444---23---112112221--1GGFEH7B3336-BCCA6FE72CFGE279A734346553-1--------1--1-334343344411-1----------------------------------------------21-11-2-1---- ------1--------35124443141422-34442122223121221133244412213222625-1232--21211111-224D41--44151364231114325-1-111-111--------------------------1-------2-------41121713-11-11114-21-L-111-27B4436-36A77- --------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------- STR:NPRED 123 STR:RPRED 28.9 SQ:SECSTR ###########################################################################TcccccTTccccccHHHHHHHHHHHHHcccHHHHTTccEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcccEEEEEEEEccTcTTcccHHHHHHHHHHHHHHHHcccccc#################################################################################################################################################################################################################################### DISOP:02AL 1-1,204-217,416-427| PSIPRED ccHHHcHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHcccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHcccccc //