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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70408.1
DDBJ      :             OsmT protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  727/915 : Eukaryota  12/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.94.1
:308 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->122 3hhgG PDBj 1e-17 36.1 %
:BLT:PDB   93->284 2hxrB PDBj 9e-14 27.1 %
:RPS:PDB   1->243 1b9nA PDBj 2e-25 17.0 %
:RPS:SCOP  1->105 1b9mA1  a.4.5.8 * 6e-21 17.1 %
:RPS:SCOP  90->292 1i69A  c.94.1.1 * 4e-31 23.4 %
:HMM:SCOP  1->114 1b9mA1 a.4.5.8 * 5.4e-28 46.7 %
:HMM:SCOP  88->307 1uthA_ c.94.1.1 * 5.6e-40 33.2 %
:RPS:PFM   5->64 PF00126 * HTH_1 1e-12 55.0 %
:RPS:PFM   93->293 PF03466 * LysR_substrate 7e-23 36.1 %
:HMM:PFM   89->293 PF03466 * LysR_substrate 2.5e-47 32.2 205/209  
:HMM:PFM   5->64 PF00126 * HTH_1 1.1e-24 53.3 60/60  
:BLT:SWISS 1->308 YFER_SHIFL e-117 70.1 %
:COIL

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70408.1 GT:GENE ACF70408.1 GT:PRODUCT OsmT protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2594573..2595499) GB:FROM 2594573 GB:TO 2595499 GB:DIRECTION - GB:PRODUCT OsmT protein GB:NOTE identified by match to protein family HMM PF00126; match to protein family HMM PF03466 GB:PROTEIN_ID ACF70408.1 GB:DB_XREF GI:194410189 LENGTH 308 SQ:AASEQ MNYSLRQLRIFITVAQAKSFSRAGDRIGLSQSAVSHSVKELERQTGVRLLDRTTREVVLTEAGQQLATRLERVLDELNSILRDAGRVGTQLTGTVRVAASQTISAHLIPQCIAQSNSLYPAIDFVLHDRPQQWVLESIRQGEVDFGIVIDPGAAVDLQCEAILSEPFLLLCRQDHPLAHQEWVSWQDLKQASLVLQDYASGSRPLIDAALAHFAIEADIVQEIGHPATLFPMVEAGIGISVLPALALPLPQGSHLQVKRLTPVVERQLMLARRKNRSLSTAAQALWDVVRTQASELTAARAKDPLYQL GT:EXON 1|1-308:0| BL:SWS:NREP 1 BL:SWS:REP 1->308|YFER_SHIFL|e-117|70.1|308/308| COIL:NAA 29 COIL:NSEG 1 COIL:REGION 64->92| BL:PDB:NREP 2 BL:PDB:REP 1->122|3hhgG|1e-17|36.1|122/294| BL:PDB:REP 93->284|2hxrB|9e-14|27.1|188/198| RP:PDB:NREP 1 RP:PDB:REP 1->243|1b9nA|2e-25|17.0|223/258| RP:PFM:NREP 2 RP:PFM:REP 5->64|PF00126|1e-12|55.0|60/60|HTH_1| RP:PFM:REP 93->293|PF03466|7e-23|36.1|191/207|LysR_substrate| HM:PFM:NREP 2 HM:PFM:REP 89->293|PF03466|2.5e-47|32.2|205/209|LysR_substrate| HM:PFM:REP 5->64|PF00126|1.1e-24|53.3|60/60|HTH_1| GO:PFM:NREP 2 GO:PFM GO:0003700|"GO:transcription factor activity"|PF00126|IPR000847| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00126|IPR000847| RP:SCP:NREP 2 RP:SCP:REP 1->105|1b9mA1|6e-21|17.1|105/122|a.4.5.8| RP:SCP:REP 90->292|1i69A|4e-31|23.4|197/206|c.94.1.1| HM:SCP:REP 1->114|1b9mA1|5.4e-28|46.7|107/0|a.4.5.8|1/1|"Winged helix" DNA-binding domain| HM:SCP:REP 88->307|1uthA_|5.6e-40|33.2|211/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 10546 OP:NHOMOORG 749 OP:PATTERN -----------------------1-----------11111111----------1-------------- 4663K222998322B8722-25225N2222247787BMXW-A47633223218A73-6--2441D5UFJD6-22211221395211112221-211---11811251215---------------1---1----1-45534---31933644534441111113538866211111111111123211---63GEEEEEDCD7CBDEFCC3CBFGDBE244A361677755Pd1222222122222225443734447741323993377445221212111----122---------------------------111---3-55AD666667646538773111A41-164421IJ542212632121-13422K55511111IBVPT68BGPDICDDEDDBEADDT-KOOFHaINJg81*ffRQVNupZXWgb474DHVFBEIAIQCBCCCCCCEEHBA48C-----------------------------14EK65S**g*******fXYZU****dcddOe*x*y***-5hhZHINJI*LtD*WDQC7757TD55544355548GF8331434215A334-51453525289698G131-2------------------2122BAQKN9BAUAHHCJKIJHAKNNIJIOHQOJSR1-1454A------SKPZFTOQSTNQNNLQP-RPPPTLJPPORMSNOOPOIjviVSAGGSFRNSSTSSSROSONRuHHHIIII8-GBBDDEBBCEED--1712111454459PFj676A28244444545TURVYIO6CCc9vuvwn*suYswwqEZXZ4422234247GOOVGGGGGMTOLLJMFLNLJ8A942321-3222------------1-------------------------------------391 -------------2---------------------------------------------------------------------------------------------------------------------------------1--------------8----1-1----7--3-1--------11--E-----4---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 305 STR:RPRED 99.0 SQ:SECSTR EEEcHHHHHHHHHHHHHccHHHHHHHHTccHHHHHHHHHHHHHHHTcccEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccTTcHHHHHHHHTcccTTccEEEEEEEEEEcccEEEccccccEEEEEcTTcccEEEEEccHHHHHHTTccTTcEEEEEccGGGcEEEccHHHHHTcccEEEEEEEcTTccEEEEEEEEEEEccccEEEEEEEcTTccEEEEEEEcGGGTTccTGGGccTTTcTTcEEEEccTcccEEEEEEEETTccccHHHHHHHHHHcTTccHHHHHHHHHHH### DISOP:02AL 87-88,291-309| PSIPRED ccccHHHHHHHHHHHHHccHHHHHHHHccccHHHHHHHHHHHHHHccEEEEEccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHcccccEEEEccccccccEEEEEEEEccEEEEEcccccccccccccHHHHccccEEEcccccHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHccccEEEEEHHHHcccccccEEEEEcccccEEEEEEEEcccccccHHHHHHHHHHHHHHHHHcccccccHHHHc //