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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ACF70434.1
DDBJ      :             metal-binding protein YodA
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  142/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.60.1
:216 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   32->204 1txlA PDBj 3e-78 74.0 %
:RPS:SCOP  32->216 1oeeA  b.60.1.4 * 9e-41 75.1 %
:HMM:SCOP  30->216 1oejA_ b.60.1.4 * 6.5e-81 54.0 %
:RPS:PFM   35->216 PF09223 * YodA 6e-57 63.0 %
:HMM:PFM   36->216 PF09223 * YodA 2.6e-87 56.4 181/182  
:HMM:PFM   2->40 PF04955 * HupE_UreJ 0.00074 34.2 38/180  
:BLT:SWISS 17->204 YODA_ECOLI 5e-78 69.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70434.1 GT:GENE ACF70434.1 GT:PRODUCT metal-binding protein YodA GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1350878..1351528 GB:FROM 1350878 GB:TO 1351528 GB:DIRECTION + GB:PRODUCT metal-binding protein YodA GB:NOTE identified by match to protein family HMM PF09223 GB:PROTEIN_ID ACF70434.1 GB:DB_XREF GI:194410215 LENGTH 216 SQ:AASEQ MVIHLKKLTMLLGMLLVNSPAFAHGHHAHGAPMTEVEQKAAAGVFDDANVRDRALTDWDGMWQSVYPYLVSGELDPVFRQKAKKDPEKTFEDIKAYYRKGYATNVETIGIENGVIEFHRDNNVASCKYNYAGYKILTYASGKKGVRYLFECKDANSKAPKYVQFSDHIIAPRKSAHFHIFMGNTSQQALLQEMENWPTYYPYQLKANEVVDEMLHH GT:EXON 1|1-216:0| BL:SWS:NREP 1 BL:SWS:REP 17->204|YODA_ECOLI|5e-78|69.1|188/216| SEG 5->16|lkkltmllgmll| SEG 21->31|afahghhahga| BL:PDB:NREP 1 BL:PDB:REP 32->204|1txlA|3e-78|74.0|173/188| RP:PFM:NREP 1 RP:PFM:REP 35->216|PF09223|6e-57|63.0|181/181|YodA| HM:PFM:NREP 2 HM:PFM:REP 36->216|PF09223|2.6e-87|56.4|181/182|YodA| HM:PFM:REP 2->40|PF04955|0.00074|34.2|38/180|HupE_UreJ| RP:SCP:NREP 1 RP:SCP:REP 32->216|1oeeA|9e-41|75.1|185/185|b.60.1.4| HM:SCP:REP 30->216|1oejA_|6.5e-81|54.0|187/187|b.60.1.4|1/1|Lipocalins| OP:NHOMO 142 OP:NHOMOORG 142 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------111------------------------------------------------------------------------------------------------------------------------1-11----1-----1----111-----1-----------11111111111111---111----------------------1--11111111111111111111111111111111111111111111----------------------------------------------------------------------------------------------------11-1---------------1-11-1--------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------11---1-1111111111-111111111111111111-111----11111111111111111-1111111--1---------------------------1---------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 173 STR:RPRED 80.1 SQ:SECSTR ###############################cccHHHHHHHTTcccGGGcccccGGGGcEEEEEcHHHHHHTTTHHHHHHHHHHcTTccHHHHHHHHHHHHcccEEEEEEETTEEEEEETTEEEEEccEEEEEEEEEcTTccEEEEEEEEcccTTcccccEEEEEcccccccccccEEEEEEcccHHHHHTccccccEEEETTc############ DISOP:02AL 1-1,23-38,216-217| PSIPRED ccEEHHHHHHHHHHHHHcccHHccccccccccccHHHHHHHHccccHHHccccccccccccEEEEccHHHcccccHHHHHHHHccccccHHHHHHHHHHHccccccEEEEEccEEEEEEccEEEEEEEEEccEEEEEEccccEEEEEEEEEcccccccccEEEEcccccccccccEEEEEEccccHHHHHHcccccccEEcccccHHHHHHHHHcc //