[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : bioB
DDBJ      :bioB         biotin synthase
Swiss-Prot:BIOB_SALSV   RecName: Full=Biotin synthase;         EC=2.8.1.6;AltName: Full=Biotin synthetase;

Homologs  Archaea  13/68 : Bacteria  674/915 : Eukaryota  112/199 : Viruses  0/175   --->[See Alignment]
c.1.28
:346 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   5->315 1r30B PDBj e-168 92.3 %
:RPS:PDB   27->288 1alaA PDBj 3e-61 11.1 %
:RPS:SCOP  5->315 1r30A  c.1.28.1 * e-137 92.3 %
:HMM:SCOP  4->315 1r30A_ c.1.28.1 * 1.4e-97 37.8 %
:RPS:PFM   142->207 PF04055 * Radical_SAM 5e-04 43.9 %
:RPS:PFM   220->312 PF06968 * BATS 2e-17 43.0 %
:HMM:PFM   220->312 PF06968 * BATS 7.8e-32 45.7 92/92  
:HMM:PFM   50->203 PF04055 * Radical_SAM 1.4e-21 26.0 150/166  
:BLT:SWISS 1->346 BIOB_SALSV 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70054.1 GT:GENE bioB GT:PRODUCT biotin synthase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 908439..909479 GB:FROM 908439 GB:TO 909479 GB:DIRECTION + GB:GENE bioB GB:PRODUCT biotin synthase GB:NOTE identified by match to protein family HMM PF04055; match to protein family HMM PF06968; match to protein family HMM TIGR00433 GB:PROTEIN_ID ACF70054.1 GB:DB_XREF GI:194409835 GB:GENE:GENE bioB LENGTH 346 SQ:AASEQ MARHPRWTLSQVTELFEKPLLELLFEAQQIHRQHFDPQQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVEQVLDSARKAKNAGSTRFCMGAAWKNPHERDMPYLEQIVQGVKAMGLETCMTLGMLNESQAQRLANAGLDYYNHNLDTSPEFYGNIITTRTYQERLDTLEKVREAGIKVCSGGIVGLGETVTDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDDVDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPAEDKDLQLFRKLGLNPQQTRVLAGDNEQQQRLEQTLMTPDTDDYYNAAAL GT:EXON 1|1-346:0| SW:ID BIOB_SALSV SW:DE RecName: Full=Biotin synthase; EC=2.8.1.6;AltName: Full=Biotin synthetase; SW:GN Name=bioB; OrderedLocusNames=SeSA_A0944; SW:KW 2Fe-2S; 4Fe-4S; Biotin biosynthesis; Complete proteome; Iron;Iron-sulfur; Metal-binding; S-adenosyl-L-methionine; Transferase. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->346|BIOB_SALSV|0.0|100.0|346/346| GO:SWS:NREP 6 GO:SWS GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|2Fe-2S| GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0009102|"GO:biotin biosynthetic process"|Biotin biosynthesis| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016740|"GO:transferase activity"|Transferase| SEG 14->26|elfekpllellfe| BL:PDB:NREP 1 BL:PDB:REP 5->315|1r30B|e-168|92.3|311/313| RP:PDB:NREP 1 RP:PDB:REP 27->288|1alaA|3e-61|11.1|262/316| RP:PFM:NREP 2 RP:PFM:REP 142->207|PF04055|5e-04|43.9|66/164|Radical_SAM| RP:PFM:REP 220->312|PF06968|2e-17|43.0|93/93|BATS| HM:PFM:NREP 2 HM:PFM:REP 220->312|PF06968|7.8e-32|45.7|92/92|BATS| HM:PFM:REP 50->203|PF04055|1.4e-21|26.0|150/166|Radical_SAM| GO:PFM:NREP 4 GO:PFM GO:0003824|"GO:catalytic activity"|PF04055|IPR007197| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF04055|IPR007197| GO:PFM GO:0051186|"GO:cofactor metabolic process"|PF06968|IPR010722| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF06968|IPR010722| RP:SCP:NREP 1 RP:SCP:REP 5->315|1r30A|e-137|92.3|311/314|c.1.28.1| HM:SCP:REP 4->315|1r30A_|1.4e-97|37.8|312/312|c.1.28.1|1/1|Radical SAM enzymes| OP:NHOMO 846 OP:NHOMOORG 799 OP:PATTERN ------------------------1--1---1---21122222-----------------------11 ----212111111111111-111111111111111111111121---1----111111--1111111111-------------11111111--111----1111111111-------1-11111-111111111-1----------11111111-1111111111111111111111111111---11---111111111111111111-111111111111---------111111111111111111111---------------------------1111----------------------------------------111221111111111-1221221-11---1111--222-1-1-1-11-111111111-----111111111111111111111111-11111111-3111111--1-----11111--21-11--111111111111111--1111111111--------1-----------11111111111111112111121111111111111111-11111111111211-1111111111121111111111-11111111121111111111111111111111111111111111111111111111111111111111111111111111111111111--111111-11111111111111111111-11111111111111111111111111111111111111111111111111111111111111111--111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111---------------------------------------1---1121-1 ------------1111111111111-11111-111111111111111111111112-11111111-11---1111111111111-111-12111111111111111-11----------------------------------------------------------------1-121181111121231111131122 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 338 STR:RPRED 97.7 SQ:SECSTR HHHHHHTTccccHHHHHHccccccccccccccTTccHHHHHHHHHHHHccccccHHHHHHHccHHHHHHHHHHHHHHHcccHHHHHHHHccHHHHHHHHHHHccTTTHHHHHHHHHHccccccHHHHHHHHHHccHHHHHHHHHHHHHHHcccHHccHHHHHHHHHHHTccccccccccHHHHHHHHHHHHHHHHTTTcccHHHHHHHHHHccHHHHHHHHHHHHHHHcccGGGGcccccccHHHHHHHHHHHHHHcHHHHHHHHHHHHHccccccHHHHHHHHHHTTHHHHHHccccccHHHHHHHHHTTccTTcHHH###HHHHHHHHTTcEEcccccc##### DISOP:02AL 1-2,317-327| PSIPRED ccccccccHHHHHHHHcccHHHHHHHHHHHHHHHHcccEEEEEEEEEEEcccccccEEEccccccccccccccccccHHHHHHHHHHHHHccccEEEEEEEccccccccHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEEEccccHHHHHHHHccccHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHccccccEEcccHHHccHHHHHHHHHHcccEEEEcccccccccccHHHHHHHHHHccccEEccccccHHHHHHHHHHHHHHccccccHHHHHcc //