[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : bioD
DDBJ      :bioD         dethiobiotin synthase
Swiss-Prot:BIOD_SALTY   RecName: Full=Dethiobiotin synthetase;         EC=6.3.3.3;AltName: Full=Dethiobiotin synthase;AltName: Full=DTB synthetase;         Short=DTBS;

Homologs  Archaea  8/68 : Bacteria  495/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:228 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->225 1byiA PDBj 3e-93 71.0 %
:RPS:PDB   2->225 1daeA PDBj 3e-39 75.8 %
:RPS:SCOP  2->225 1a82A  c.37.1.10 * 2e-31 75.0 %
:HMM:SCOP  1->208 1byiA_ c.37.1.10 * 6.8e-63 41.5 %
:HMM:PFM   6->194 PF01656 * CbiA 1.9e-18 22.3 148/194  
:BLT:SWISS 1->228 BIOD_SALTY e-130 99.1 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67577.1 GT:GENE bioD GT:PRODUCT dethiobiotin synthase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 911365..912051 GB:FROM 911365 GB:TO 912051 GB:DIRECTION + GB:GENE bioD GB:PRODUCT dethiobiotin synthase GB:NOTE identified by match to protein family HMM PF01656; match to protein family HMM TIGR00347 GB:PROTEIN_ID ACF67577.1 GB:DB_XREF GI:194407358 GB:GENE:GENE bioD LENGTH 228 SQ:AASEQ MTKRYFVTGTDTEVGKTVASCALLQAATQLGYQTVGYKPVASGSEMTTDGLRNSDALALQRNSSLPQPYSAINPYTFAEPTSPHIVSADEGRAIDAAVLSRGLRTLEAQADWVLTEGAGGWFTPLSATLTFADWVQTEQLPVILVVGVKLGCINHAMLTALAVEQAGLPLVGWIANDIQPPGARHGEYLATLRRIIPAPLLGEIPWLGISPSQAATGQYLDLSPLERA GT:EXON 1|1-228:0| SW:ID BIOD_SALTY SW:DE RecName: Full=Dethiobiotin synthetase; EC=6.3.3.3;AltName: Full=Dethiobiotin synthase;AltName: Full=DTB synthetase; Short=DTBS; SW:GN Name=bioD; OrderedLocusNames=STM0797; SW:KW ATP-binding; Biotin biosynthesis; Complete proteome; Ligase;Magnesium; Nucleotide-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->228|BIOD_SALTY|e-130|99.1|228/228| GO:SWS:NREP 4 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0009102|"GO:biotin biosynthetic process"|Biotin biosynthesis| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| BL:PDB:NREP 1 BL:PDB:REP 2->225|1byiA|3e-93|71.0|224/224| RP:PDB:NREP 1 RP:PDB:REP 2->225|1daeA|3e-39|75.8|219/219| HM:PFM:NREP 1 HM:PFM:REP 6->194|PF01656|1.9e-18|22.3|148/194|CbiA| RP:SCP:NREP 1 RP:SCP:REP 2->225|1a82A|2e-31|75.0|224/224|c.37.1.10| HM:SCP:REP 1->208|1byiA_|6.8e-63|41.5|207/224|c.37.1.10|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 608 OP:NHOMOORG 510 OP:PATTERN ------------------------------------11111-1-----------------------11 ------11---------------------------------------------------------------------------111111111-111----1111111-------------------111-11---1----------11-1111----11111--11-1111111111111111--------111111111111111111-111-111111-1---------11---------------111-----------------------1------------------------------------------------1--1-1111111-1---11111--11-----11--1----------1-1-1111111-----111-11111111111111111111-12-11111-411-11---1------1111----------11111111111-11--1111---------------------------1-11----11111111111111111111111111111-1111111--111-1-1111111111111111111111-1-111-11-1---1111111111--1---1-1---1-------1--1-1--11-1-221111111111111111111111111111111--1111-1-1-122222222222222222-22222222222222222222222222222222222222222222222222221222222212222--1111-11111111111222121222222--21-111111111111111111111111111111111111111111111111111111111111111111111111111------------------------------------------------1 ----------------------------------------------------------------1---------1------11--1-1---------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 228 STR:RPRED 100.0 SQ:SECSTR ccEEEEEEEccTTccHHHHHHHHHHHHHHTTccEEEEccEEEccEEETTEEEcHHHHHHHHHccccccHHHHccEEEcccccHHHHHHHHTccccHHHHHHHHHHHHTTccEEEEEccccTTccccccccHHHHHHHHTccEEEEEEccTTHHHHHHHHHHHHHHTTccEEEEEEEccccccTTHHHHHHHHHHHccccEEEEEcccTTcTcccccGGGccGGGccHH DISOP:02AL 1-1,227-229| PSIPRED ccEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEccHHccccccccccccHHHHHHHHHHcccccHHHccHHHccccccHHHHHHHccccccHHHHHHHHHHHHHcccEEEEEccccccccccccccHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHccccEEEEEEEcccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHcccHHHHcc //