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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ccmF.1
DDBJ      :ccmF         cytochrome c-type biogenesis protein CcmF
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  417/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
:643 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   151->292 PF01578 * Cytochrom_C_asm 2e-21 48.2 %
:HMM:PFM   89->296 PF01578 * Cytochrom_C_asm 4e-56 36.8 193/214  
:HMM:PFM   476->524 PF05140 * ResB 3.9e-05 18.4 49/467  
:BLT:SWISS 1->642 CCMF_ECOLI 0.0 84.6 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67742.1 GT:GENE ccmF.1 GT:PRODUCT cytochrome c-type biogenesis protein CcmF GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2396567..2398498) GB:FROM 2396567 GB:TO 2398498 GB:DIRECTION - GB:GENE ccmF GB:PRODUCT cytochrome c-type biogenesis protein CcmF GB:NOTE identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 GB:PROTEIN_ID ACF67742.1 GB:DB_XREF GI:194407523 GB:GENE:GENE ccmF LENGTH 643 SQ:AASEQ MMPEYGHALLCLALGVALLLSVYPLWGVARGDARMMASAGVFAWLLFICVAGAFFVLVHAFVVNDFTVAYVAGNSNTQLPVWYRVAATWGAHEGSLLLWVLLMSGWTLAVAVFSRQVPADIVARVLAVMGMVCAGFLAFILFTSGPFARTLPAFPVEGRDLNPLLQDPGLIFHPPLLYMGYVGFSVAFAFAIAALLSGRLDSAFTRFARPWTLAAWVFLTLGIVLGSAWAYYELGWGGWWFWDPVENASFMPWLAGTALLHSLAVTEQRAGFKAWTLLLSICAFSLCLLGTFLVRSGVLVSVHAFASDPARGMFILAFMVLVTGGSLLLFAVRGHRVRSRVNNALWSRESLLLGNNVLLMAAMLVVLLGTLLPLVHKQLGLGSISVGEPFFNTMFTWLMVPFALLLGVGPLVRWGRDRPRNIRTLLLTALVSTLVLSVLLPWLLEDKIIAMTAVGMAMACWIAVLAVAEAVQRVSRGTKTSLSYWGMVAAHLGLAVTITGIAFSQNYSVERDVRMRAGDSVTIHDYRFTFPEVRDITGPNYRGGVALIGVTRHGEPEAVLHAEKRLYNTSRMVMTEAAIDGGLTRDLYAALGEELDNGAWAVRLYYKPFVRWIWAGGLLMALGGLLCLADPRYRRRKPLPEAG GT:EXON 1|1-643:0| BL:SWS:NREP 1 BL:SWS:REP 1->642|CCMF_ECOLI|0.0|84.6|642/647| TM:NTM 14 TM:REGION 7->29| TM:REGION 44->66| TM:REGION 93->115| TM:REGION 122->144| TM:REGION 174->196| TM:REGION 210->231| TM:REGION 278->300| TM:REGION 312->334| TM:REGION 352->374| TM:REGION 393->415| TM:REGION 420->442| TM:REGION 449->471| TM:REGION 485->507| TM:REGION 608->629| SEG 8->20|allclalgvalll| SEG 357->375|vllmaamlvvllgtllplv| SEG 424->444|tllltalvstlvlsvllpwll| SEG 615->629|aggllmalggllcla| RP:PFM:NREP 1 RP:PFM:REP 151->292|PF01578|2e-21|48.2|137/212|Cytochrom_C_asm| HM:PFM:NREP 2 HM:PFM:REP 89->296|PF01578|4e-56|36.8|193/214|Cytochrom_C_asm| HM:PFM:REP 476->524|PF05140|3.9e-05|18.4|49/467|ResB| GO:PFM:NREP 3 GO:PFM GO:0006461|"GO:protein complex assembly"|PF01578|IPR002541| GO:PFM GO:0008535|"GO:respiratory chain complex IV assembly"|PF01578|IPR002541| GO:PFM GO:0016020|"GO:membrane"|PF01578|IPR002541| OP:NHOMO 568 OP:NHOMOORG 432 OP:PATTERN 11-2-1------------1----11------1-----------------11-1--------------- 1111--------11--------------------1-1111----------------------1-1--------------111-----------------------11111-----------------------11-11111---11----------------1--------------------11111----------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1-11---11111-------1--111111111111111111111111111111111-11111111111-111121111111111113111111112111111111111111111111111111111-11111111111111111111-11-2----------------------4111221111-11----1-1---21-1-1121111111121111--1--2111111121111221211----1111---------------------------22-121111111122111222222222222---1111------21--2-12222222222-222222222222222222111122---323333333333333312212222--111111111111---1-----1111111-1222222222212112-------1211111111111111111111----------2222111112222211222222231111111-111111------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------1-11---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 636-644| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHcccccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEcccHHHHccHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEEEccccEEEEccEEEEEEcccccccccccEEEEEEEEEEccEEEEEEEEccEEEEccccccccHHHHccccHHEEEEEcccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHcccHHHHccccccccc //