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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : citC.1
DDBJ      :citC         [citrate (pro-3S)-lyase] ligase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  119/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.26.1d.108.1
:343 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   154->262 1tfuA PDBj 7e-04 25.5 %
:RPS:PDB   10->123 3efaA PDBj 4e-04 13.2 %
:RPS:PDB   125->342 2ejcA PDBj 2e-16 14.9 %
:RPS:SCOP  133->319 1ihoA  c.26.1.4 * 1e-17 16.5 %
:HMM:SCOP  19->125 1xebA_ d.108.1.1 * 5.5e-09 30.8 %
:HMM:SCOP  144->337 1tfuA_ c.26.1.3 * 9.7e-27 29.4 %
:RPS:PFM   146->332 PF08218 * Citrate_ly_lig 5e-70 68.1 %
:HMM:PFM   146->332 PF08218 * Citrate_ly_lig 3.3e-84 53.3 182/182  
:HMM:PFM   44->101 PF00583 * Acetyltransf_1 2.3e-05 34.5 58/83  
:BLT:SWISS 1->342 CITC_KLEPN e-130 72.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67502.1 GT:GENE citC.1 GT:PRODUCT [citrate (pro-3S)-lyase] ligase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 64106..65137 GB:FROM 64106 GB:TO 65137 GB:DIRECTION + GB:GENE citC GB:PRODUCT [citrate (pro-3S)-lyase] ligase GB:NOTE identified by match to protein family HMM PF00583; match to protein family HMM PF08218; match to protein family HMM TIGR00124; match to protein family HMM TIGR00125 GB:PROTEIN_ID ACF67502.1 GB:DB_XREF GI:194407283 GB:GENE:GENE citC LENGTH 343 SQ:AASEQ MNLIFKRIYLQKDVLRRESVAMFLEGVGLALEDDCEIAVCAYWQGEIVGCGSLAGNVLKCIAVSPVLQGEGLSLKLLTELLTLAYELNRSELFLFTKPQNRLLFSGAGFWPIAQAGELAVLMENSSERLARFCRQLALYRQPGKTIGAIVMNANPFTLGHRYLVEQAAAACDWLHLFVVKEDASFFSYTDRWALIEQGIAGIDNVTLHSGSAYMISRATFPGYFLKEKGVVDDCHCQIDLQLFREHLAPALGITHRFVGSEPFCPLTCAYNQRMHDILHDPKRSGPVIEVVELARVEKNGTAISASRVRKLYSERNWPAISALVPAGTLAYLQRHAARHTETI GT:EXON 1|1-343:0| BL:SWS:NREP 1 BL:SWS:REP 1->342|CITC_KLEPN|e-130|72.4|341/342| SEG 72->87|lslklltelltlayel| BL:PDB:NREP 1 BL:PDB:REP 154->262|1tfuA|7e-04|25.5|106/157| RP:PDB:NREP 2 RP:PDB:REP 10->123|3efaA|4e-04|13.2|114/143| RP:PDB:REP 125->342|2ejcA|2e-16|14.9|202/280| RP:PFM:NREP 1 RP:PFM:REP 146->332|PF08218|5e-70|68.1|182/182|Citrate_ly_lig| HM:PFM:NREP 2 HM:PFM:REP 146->332|PF08218|3.3e-84|53.3|182/182|Citrate_ly_lig| HM:PFM:REP 44->101|PF00583|2.3e-05|34.5|58/83|Acetyltransf_1| RP:SCP:NREP 1 RP:SCP:REP 133->319|1ihoA|1e-17|16.5|182/282|c.26.1.4| HM:SCP:REP 19->125|1xebA_|5.5e-09|30.8|107/0|d.108.1.1|1/1|Acyl-CoA N-acyltransferases (Nat)| HM:SCP:REP 144->337|1tfuA_|9.7e-27|29.4|153/157|c.26.1.3|1/1|Nucleotidylyl transferase| OP:NHOMO 135 OP:NHOMOORG 119 OP:PATTERN -------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11--11---1-11--111--1-11-----1111-11-----------1111111111111-----------1------------------1-1-1----------1---1--------1-------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------1-1-----1------------------------------------------------------------------------------111111-11111111-1-112111111111111111111-11---2122222222222222111-11----1--------------------------------11-11111----------------------------------------------1111111------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 333 STR:RPRED 97.1 SQ:SECSTR #########HHHHHTTTTTcccHHHHccTTccTTccEEEEEEETTEEEEEEEEEEcEEEEEEEcGGGTTccHHHHHHHHHHHHHHHTTccEEEEEEEGGGHHHHHHTTcEEEEcTTcEEEcccccHHHHHHHHHHHHHHHHHTTccEEEEEEcccccHHHHHHHHHHHHHccEEEEEEccGGGccccHHHHHHHHHHHTTTccEEEcccHHHHHHHccTTcccccccccGGGTTTGGGcTTHHHHHHHHHHHHHHHHcccEEEEEGGGHHHHTHHHHHHHHHHTTcccEEEEEccccTTcccccGGGGGcHHcHHHHHHTHHHHHHHHHHHHHHHHHHTTcc# DISOP:02AL 1-1,336-344| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEEEccEEEEEEcccccEEEEEEEcHHHccccHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHcccEEccccccEEEEEEccHHHHHHHHHHccccccccccEEEEEEccccccHHHHHHHHHHHHHccEEEEEEEccccccccHHHHHHHHHHHHcccccEEEEccccEEEEHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHHHHHHccccccccEEEEEEEcccccccEEcHHHHHHHHHcccHHHHHHHccHHHHHHHHHHHHHHHHcc //