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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : clpB
DDBJ      :clpB         ATP-dependent chaperone protein ClpB
Swiss-Prot:CLPB_SALTY   RecName: Full=Chaperone protein clpB;

Homologs  Archaea  6/68 : Bacteria  892/915 : Eukaryota  184/199 : Viruses  0/175   --->[See Alignment]
a.174.1c.37.1
:857 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->854 1qvrA PDBj 0.0 52.9 %
:RPS:PDB   157->284 3bbnG PDBj 2e-37 18.8 %
:RPS:PDB   257->381 1eaqA PDBj 1e-14 10.4 %
:RPS:PDB   381->647 1d0sA PDBj 1e-42 14.1 %
:RPS:PDB   680->803 3cfuA PDBj 6e-30 16.5 %
:RPS:SCOP  4->142 1khyA  a.174.1.1 * 3e-28 82.6 %
:RPS:SCOP  159->435,501->545 1qvrA2  c.37.1.20 * e-120 71.1 %
:RPS:SCOP  547->852 1ksfX3  c.37.1.20 * 3e-42 41.4 %
:HMM:SCOP  4->156 1qvrA1 a.174.1.1 * 1.3e-45 47.6 %
:HMM:SCOP  158->545 1qvrA2 c.37.1.20 * 1.4e-104 40.7 %
:HMM:SCOP  546->859 1qvrA3 c.37.1.20 * 1.5e-91 41.4 %
:RPS:PFM   203->338 PF00004 * AAA 4e-07 32.2 %
:RPS:PFM   383->485 PF08317 * Spc7 4e-05 30.6 %
:RPS:PFM   597->757 PF07724 * AAA_2 5e-33 52.4 %
:RPS:PFM   766->847 PF10431 * ClpB_D2-small 2e-11 42.7 %
:HMM:PFM   596->760 PF07724 * AAA_2 2.8e-58 52.3 153/171  
:HMM:PFM   203->337 PF00004 * AAA 1.4e-16 26.3 118/130  
:HMM:PFM   766->849 PF10431 * ClpB_D2-small 2.7e-30 48.8 84/89  
:HMM:PFM   17->68 PF02861 * Clp_N 6.9e-17 36.5 52/53  
:HMM:PFM   94->145 PF02861 * Clp_N 2.9e-14 40.4 52/53  
:HMM:PFM   565->622 PF05496 * RuvB_N 0.0008 27.8 54/234  
:HMM:PFM   417->515 PF05622 * HOOK 0.00069 27.8 97/713  
:BLT:SWISS 1->857 CLPB_SALTY 0.0 100.0 %
:PROS 294->306|PS00870|CLPAB_1
:PROS 631->649|PS00871|CLPAB_2
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67337.1 GT:GENE clpB GT:PRODUCT ATP-dependent chaperone protein ClpB GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2810313..2812886) GB:FROM 2810313 GB:TO 2812886 GB:DIRECTION - GB:GENE clpB GB:PRODUCT ATP-dependent chaperone protein ClpB GB:NOTE identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346 GB:PROTEIN_ID ACF67337.1 GB:DB_XREF GI:194407118 GB:GENE:GENE clpB LENGTH 857 SQ:AASEQ MRLDRLTNKFQLALADAQSLALGHDNQFIEPLHLMSALLNQEGGSIRPLLTSAGINAGQLRTAIDQALSRLPQVEGTGGDVQPSSELVRVLNLCDKLAQKRGDNFISSELFVLAALESRGTLTDLLKSAGATTANITQAIEQMRGGESVNDQGAEDQRQALKKYTVDLTERAEQGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIINGEVPEGLKGRRVLALDMGALVAGAKYRGEFEERLKGVLNDLAKQEGNVILFIDELHTMVGAGKADGAMDAGNMLKPALARGELHCVGATTLDEYRQYIEKDAALERRFQKVFVAEPSVEDTIAILRGLKERYELHHHVQITDPAIVAAATLSHRYIADRQLPDKAIDLIDEAASSIRMQIDSKPEELDRLDRRIIQLKLEQQALMKESDEASKKRLDMLNEELDDKERQYSELEEEWKAEKASLSGTQTIKAELEQAKIAIEQARRVGDLARMSELQYGKIPELEKQLEAATQSEGKTMRLLRNKVTDAEIAEVLARWTGIPVSRMLEGEREKLLRMEQELHSRVIGQNEAVEAVSNAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKALANFMFDSDDAMVRIDMSEFMEKHSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNLGSDLIQERFGELDYGRMKEMVLGVVSQNFRPEFINRIDEVVVFHPLGEQHIASIAQIQLQRLYKRLEERGYEIHISDEALKLLSANGYDPVYGARPLKRAIQQQIENPLAQQILSGELVPGKVIRLEANDDRIVAVQ GT:EXON 1|1-857:0| SW:ID CLPB_SALTY SW:DE RecName: Full=Chaperone protein clpB; SW:GN Name=clpB; OrderedLocusNames=STM2660; SW:KW ATP-binding; Chaperone; Coiled coil; Complete proteome; Cytoplasm;Nucleotide-binding; Repeat; Stress response. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->857|CLPB_SALTY|0.0|100.0|857/857| GO:SWS:NREP 4 GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006950|"GO:response to stress"|Stress response| PROS 294->306|PS00870|CLPAB_1|PDOC00679| PROS 631->649|PS00871|CLPAB_2|PDOC00679| COIL:NAA 75 COIL:NSEG 1 COIL:REGION 410->484| SEG 11->22|qlaladaqslal| SEG 285->296|gagkadgamdag| SEG 648->661|gappgyvgyeeggy| BL:PDB:NREP 1 BL:PDB:REP 26->854|1qvrA|0.0|52.9|775/803| RP:PDB:NREP 4 RP:PDB:REP 157->284|3bbnG|2e-37|18.8|128/154| RP:PDB:REP 257->381|1eaqA|1e-14|10.4|115/121| RP:PDB:REP 381->647|1d0sA|1e-42|14.1|205/346| RP:PDB:REP 680->803|3cfuA|6e-30|16.5|121/141| RP:PFM:NREP 4 RP:PFM:REP 203->338|PF00004|4e-07|32.2|118/123|AAA| RP:PFM:REP 383->485|PF08317|4e-05|30.6|98/325|Spc7| RP:PFM:REP 597->757|PF07724|5e-33|52.4|147/160|AAA_2| RP:PFM:REP 766->847|PF10431|2e-11|42.7|82/90|ClpB_D2-small| HM:PFM:NREP 7 HM:PFM:REP 596->760|PF07724|2.8e-58|52.3|153/171|AAA_2| HM:PFM:REP 203->337|PF00004|1.4e-16|26.3|118/130|AAA| HM:PFM:REP 766->849|PF10431|2.7e-30|48.8|84/89|ClpB_D2-small| HM:PFM:REP 17->68|PF02861|6.9e-17|36.5|52/53|Clp_N| HM:PFM:REP 94->145|PF02861|2.9e-14|40.4|52/53|Clp_N| HM:PFM:REP 565->622|PF05496|0.0008|27.8|54/234|RuvB_N| HM:PFM:REP 417->515|PF05622|0.00069|27.8|97/713|HOOK| GO:PFM:NREP 2 GO:PFM GO:0005524|"GO:ATP binding"|PF00004|IPR003959| GO:PFM GO:0005524|"GO:ATP binding"|PF07724|IPR013093| RP:SCP:NREP 3 RP:SCP:REP 4->142|1khyA|3e-28|82.6|132/132|a.174.1.1| RP:SCP:REP 159->435,501->545|1qvrA2|e-120|71.1|290/357|c.37.1.20| RP:SCP:REP 547->852|1ksfX3|3e-42|41.4|290/306|c.37.1.20| HM:SCP:REP 4->156|1qvrA1|1.3e-45|47.6|145/0|a.174.1.1|1/1|Double Clp-N motif| HM:SCP:REP 158->545|1qvrA2|1.4e-104|40.7|386/0|c.37.1.20|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 546->859|1qvrA3|1.5e-91|41.4|314/315|c.37.1.20|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2927 OP:NHOMOORG 1082 OP:PATTERN ----------------------------------1-----1--11--2-1------------------ 2372422244222222222-22222222222222223444243232222222323232224322236443223223222224322222432312223--2232224232222222222222222433333333333444452226234334442233333333333454563333333333333332222123222222222222222222222222233322223333432153333333443334432222333334333334433444543533333363333344333333333333333333334333543333333332243222222223222333222233321222222212211111112213332222422222233232222222322222222223-24224432232233332342222232222234323322233333333333322222222222222--11111121111112122-2223233324755356557777566888837634555322323323223322422232322322222222222233222222232332222111122131335398222112222222222222222222122223334434222322222232222222222331-22222------24233232333244443-3123223325343222223433336532433432333333332422222232-3777777477761122222222222236331111211111111113333333222428888344454344343311111111124343333333444322324224452222222233333322222212331----1-11111111111111--1112223332233242 3311223-84312222322222222222232222222222322222222222222222222223222222222232213222122222-2823224222223134412B321111-11111111311313B1-212111121111111-111121-2121--1212-------2145B5t44454B8AI2AA4653423 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 852 STR:RPRED 99.4 SQ:SECSTR ##ccEEcHHHHHHHHHHHHHHHTTTccEEcHHHHHHHHccccccHHHHHcTTccHHHHccEEEEcccEEEEEEccHHHHHHHTcHHHHcccccccccTTccHHHHTEEEEEEEEEEEEccccEEEEEEEEETTEEEEEEEEEcTTTccEEEEEEEEcccccTTTcccGGGHHHHcccTTcHHHHHHHcHHHHTTTTTccccTTHHHHHHGGGTcccEEEccEEETTccEEEccHHHHHHHHTTHHHHHHHHHHHTHHHHHHHHHHHHTcTTcEEEEEccTHHHccccEEEEEEHHHHHHHHHHHHHHccEEEEccHHHHHTcccEEccccccTTcccccHHHHGGcccccGTccTTccccEEETTTEEEcccccccEccccHHHHHTcccccHHHHHHHTTTccccccccccccTTcccccEEEEEEcGGGTTTcccHHHHHTccccTTTTTHcccTTccGTTTccccHHTHHHHHHHHHHHHHTcGGGTTcccccEEEEEEEEEccGGGGGTcccccTTHEHHHHHHHHHHTccHHHHHHHHTTcEEEEEEEEccTTcEEcccccccccTTTccccHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEcTTTHHHHHHHHHHHHTccHHHHcccTTTccGHGGHHHHHccEEEEEEEETTEEEEHHEEEETTccGGGcHHHHccccEEEEEEEccGGGTHHHHTTcHHHHHHHHGGGccHHHHHHHHHHTHHHHTccTHHHHHHHHHHHHHHTccccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHccccTTTGGGcccccHHHHHHHHHccccHHHHHcccccHHHHHHHHHHEEcGGGTT### DISOP:02AL 1-1,71-81,145-162,409-409,514-526,591-591,729-740| PSIPRED ccHHHccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHHHHHcccccccccccEEcHHHHHHHHHHHHHHHHHccccccHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHHcccccHHHHcccccccccHHHHcccHHHHHHcccccccccHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHHHHcccccHHHcccEEEEEEcHHHHcccccHHHHHHHHHHHHHHHHHccccEEEEEEcHHHHccccccccHHHHHHHHHHHHHcccEEEEEcccccccccHHcccHHHHHccEEEEcccccHHHHHHHHHHHHHHHHHHcccEEcHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccHHHHcHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEcccccHHHHHHHHHHHHHccccccEEEEEccccccHHHHHHHccccccccccccccHHHHHHHHccccEEEEEcHHHccHHHHHHHHHHHHcccccccccEEEccccEEEEEEccccHHHHHHHHccccHHHHHHHHHHHHHHHccHHHHccccEEEEcccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHcccccccEEEEEEEccEEEEEc //