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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : cydA
DDBJ      :cydA         cytochrome d ubiquinol oxidase, subunit I
Swiss-Prot:CYDA_SHIFL   RecName: Full=Cytochrome d ubiquinol oxidase subunit 1;         EC=1.10.3.-;AltName: Full=Cytochrome d ubiquinol oxidase subunit I;AltName: Full=Cytochrome bd-I oxidase subunit I;

Homologs  Archaea  14/68 : Bacteria  612/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:522 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   7->310,381->503 PF01654 * Bac_Ubq_Cox e-112 68.2 %
:HMM:PFM   7->502 PF01654 * Bac_Ubq_Cox 7.3e-187 56.3 435/436  
:BLT:SWISS 1->522 CYDA_SHIFL 0.0 96.2 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67181.1 GT:GENE cydA GT:PRODUCT cytochrome d ubiquinol oxidase, subunit I GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 857938..859506 GB:FROM 857938 GB:TO 859506 GB:DIRECTION + GB:GENE cydA GB:PRODUCT cytochrome d ubiquinol oxidase, subunit I GB:NOTE identified by match to protein family HMM PF01654 GB:PROTEIN_ID ACF67181.1 GB:DB_XREF GI:194406962 GB:GENE:GENE cydA LENGTH 522 SQ:AASEQ MLDIVELSRLQFALTAMYHFLFVPLTLGMAFLLAIMETVYVLSGKQIYKDMTKFWGKLFGINFALGVATGLTMEFQFGTNWSYYSHYVGDIFGAPLAIEGLMAFFLESTFVGLFFFGWDRLSKVQHMCVTWLVALGSNLSALWILVANGWMQNPIAADFNFETMRMEMVSFSELVLNPVAQVKFVHTVASGYVTGAMFILGISAYYMLKGRDFAFAKRSFAIAASFGMAAVLSVIVLGDESGYEMGDVQKTKLAAIEAEWETQPAPASFTLFGIPDQDKQENHLAIQIPYALGIIATRSVDTPVIGLKDLMVQHEERIRNGMKAYELLEQLRAGSTDQAVRDQFNSMKKDLGYGLLLKRYTPNVTDATEAQIQQATKDSIPRVAPLYFAFRIMVACGFLLLAIIALSFWSVIRNRIGEKKWLLRAALYGIPLPWIAVEAGWFVAEYGRQPWAIGEVLPTAVANSSLTVGDLLFSMFLICGLYTLFLVAELFLMFKFARLGPSSLKTGRYHFEQSTVTSQPAR GT:EXON 1|1-522:0| SW:ID CYDA_SHIFL SW:DE RecName: Full=Cytochrome d ubiquinol oxidase subunit 1; EC=1.10.3.-;AltName: Full=Cytochrome d ubiquinol oxidase subunit I;AltName: Full=Cytochrome bd-I oxidase subunit I; SW:GN Name=cydA; OrderedLocusNames=SF0564, S0577; SW:KW Cell inner membrane; Cell membrane; Complete proteome;Electron transport; Formylation; Heme; Iron; Membrane; Metal-binding;Oxidoreductase; Transmembrane; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->522|CYDA_SHIFL|0.0|96.2|522/522| GO:SWS:NREP 9 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0022900|"GO:electron transport chain"|Electron transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 8 TM:REGION 18->40| TM:REGION 91->113| TM:REGION 126->148| TM:REGION 176->198| TM:REGION 220->242| TM:REGION 386->408| TM:REGION 422->444| TM:REGION 472->494| RP:PFM:NREP 1 RP:PFM:REP 7->310,381->503|PF01654|e-112|68.2|425/432|Bac_Ubq_Cox| HM:PFM:NREP 1 HM:PFM:REP 7->502|PF01654|7.3e-187|56.3|435/436|Bac_Ubq_Cox| GO:PFM:NREP 3 GO:PFM GO:0016020|"GO:membrane"|PF01654|IPR002585| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01654|IPR002585| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01654|IPR002585| OP:NHOMO 970 OP:NHOMOORG 629 OP:PATTERN -----1-------------1-11--421-1--------------------11-----1---122---- 11111-11111--111111-11--1211111-11112111111111111111111-11--11111121112--------111-11-111111-111----11-1-1-1-111111111111111111-11-11-11--------2-1111---1111-------11141---------------1------12233333333233333312222233312111111111112-111111111111111111111-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------2--1-11-1----11--------111111-----122111-11113111111111111-33234133211-3111-111111131-1-11111111--2222222221111-31------------11111111111111-1---12-1333233332333222255533333124542222-1112-1---11111-11--2-211----------12--1211111121111121211111122221113111-111111--1--------111-11221311211121222211221221121211--1-11-------23122322222222222-2222222222222222222332223233333333333333232222222221-211111111111---12222122221111311111111111111122222121112111212222112112111211112121-111133333122112234344434-------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 510-523| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEccEEEEccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEEccccEEEEEEEccccHHHHHccccccccccHHHccHHHHHHHccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEcEEEcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHcccccccccccccccccc //