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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : cydD
DDBJ      :cydD         ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD
Swiss-Prot:             

Homologs  Archaea  56/68 : Bacteria  897/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.1.4c.135.1c.37.1d.153.1f.37.1
:588 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   79->580 2hydA PDBj 3e-42 27.6 %
:RPS:PDB   81->584 3b60A PDBj 5e-38 18.2 %
:RPS:SCOP  78->188 1ps9A1  c.1.4.1 * 2e-04 12.3 %
:RPS:SCOP  188->427 1ai4.1  d.153.1.2 * 1e-33 17.5 %
:RPS:SCOP  406->575 2gx8A1  c.135.1.1 * 6e-15 8.0 %
:HMM:SCOP  5->331 1pf4A2 f.37.1.1 * 2.3e-56 22.5 %
:HMM:SCOP  350->569 1pf4A1 c.37.1.12 * 2.8e-55 38.6 %
:RPS:PFM   77->279 PF00664 * ABC_membrane 6e-16 27.1 %
:RPS:PFM   341->450 PF07682 * SOR 6e-04 30.9 %
:RPS:PFM   503->543 PF02463 * SMC_N 8e-04 39.0 %
:HMM:PFM   26->289 PF00664 * ABC_membrane 6.8e-42 22.0 264/275  
:HMM:PFM   390->513 PF00005 * ABC_tran 7.7e-20 37.5 112/118  
:HMM:PFM   497->551 PF02463 * SMC_N 3e-05 32.7 55/220  
:HMM:PFM   361->398 PF03193 * DUF258 1.2e-06 43.2 37/161  
:BLT:SWISS 1->588 CYDD_ECOLI 0.0 89.6 %
:PROS 486->500|PS00211|ABC_TRANSPORTER_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66691.1 GT:GENE cydD GT:PRODUCT ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1037712..1039478) GB:FROM 1037712 GB:TO 1039478 GB:DIRECTION - GB:GENE cydD GB:PRODUCT ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GB:NOTE identified by match to protein family HMM PF00005; match to protein family HMM PF00664; match to protein family HMM TIGR02857 GB:PROTEIN_ID ACF66691.1 GB:DB_XREF GI:194406472 GB:GENE:GENE cydD LENGTH 588 SQ:AASEQ MNKTRQKDLTRWLKQQSVISQRWLNISRLLGFMSGVLIVAQAWIMARILQHMIMENIPREALLLPFILLILVFVLRAWVVWLRERVGFHAGQHIRFEIRRQVLDRLQQAGPAWIQGKPAGSWATLVLEQIDDMHDYYARYLPQMALAVCVPLLIVAAIFPSNWAAALILLGTAPLIPLFMAMVGMGAADANRRNFLALARLSGHFLDRLRGMETLRIFGRGEAETESIRAASQDFRQRTMEVLRLAFLSSGVLEFFTSLSIALVAVYFGFSYLGELNFGHYGTGVTLAAGFLALILAPEFFQPLRDLGTFYHAKAQAVGAADSLKTFLETPLAHPARGEVELAENEPVTIDAVNLIITSPEGKTLAGPLNFSLAAGERAVLVGRSGSGKSSLLNVLSGFLSYQGSLRINGVELRDLSPESWRQHLSWVGQNPQLPAATLRENVLLARPDASEQELYAALDAAWVSEFLPLLPQGVDTPLGNHASRLSVGQAQRVAVARALLNPCQLLLLDEPAASLDAHSEQRVMQALKAASKRQTTLMVTHQLEDLADWDAIWVMQDGAIVEQGSYAELSAANGAFATLLAHRQEDI GT:EXON 1|1-588:0| BL:SWS:NREP 1 BL:SWS:REP 1->588|CYDD_ECOLI|0.0|89.6|588/588| PROS 486->500|PS00211|ABC_TRANSPORTER_1|PDOC00185| TM:NTM 6 TM:REGION 25->47| TM:REGION 59->81| TM:REGION 139->161| TM:REGION 166->187| TM:REGION 245->267| TM:REGION 281->303| SEG 62->75|lllpfillilvfvl| SEG 490->501|qaqrvavarall| BL:PDB:NREP 1 BL:PDB:REP 79->580|2hydA|3e-42|27.6|485/578| RP:PDB:NREP 1 RP:PDB:REP 81->584|3b60A|5e-38|18.2|495/572| RP:PFM:NREP 3 RP:PFM:REP 77->279|PF00664|6e-16|27.1|203/274|ABC_membrane| RP:PFM:REP 341->450|PF07682|6e-04|30.9|94/303|SOR| RP:PFM:REP 503->543|PF02463|8e-04|39.0|41/536|SMC_N| HM:PFM:NREP 4 HM:PFM:REP 26->289|PF00664|6.8e-42|22.0|264/275|ABC_membrane| HM:PFM:REP 390->513|PF00005|7.7e-20|37.5|112/118|ABC_tran| HM:PFM:REP 497->551|PF02463|3e-05|32.7|55/220|SMC_N| HM:PFM:REP 361->398|PF03193|1.2e-06|43.2|37/161|DUF258| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF02463|IPR003395| GO:PFM GO:0005694|"GO:chromosome"|PF02463|IPR003395| RP:SCP:NREP 3 RP:SCP:REP 78->188|1ps9A1|2e-04|12.3|106/330|c.1.4.1| RP:SCP:REP 188->427|1ai4.1|1e-33|17.5|229/763|d.153.1.2| RP:SCP:REP 406->575|2gx8A1|6e-15|8.0|163/359|c.135.1.1| HM:SCP:REP 5->331|1pf4A2|2.3e-56|22.5|311/311|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 350->569|1pf4A1|2.8e-55|38.6|220/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 14980 OP:NHOMOORG 1151 OP:PATTERN 661211-2111-11112121-214533354432-21-1-11--41338--641223422133112--1 87E3RBGBGGI96788AAA-A722DCAA9AA87AAAJRHI4HCUDIEDG988DHK5CF44FJBCM5GPRY9CAAACDCF5YI3312128984-446A--45A755C5H7B111111111111113A96BF9ACBEB9CCFF323O6LDHNCCB7899B797B9DBCKSXVC5D87676A777577933EA3C7FHHJGJGLMBHLLJHMJJIIGKLLOAEGJIIELMMLKLOXC99999989999999B768AQFCHPQI8F8KNLABUSHB8CBIFDEGIKMLHLKKKINLJHELMIKK9A98AAABDCB98NKKIHHJJKGHCIDFJJJLNMK6MCHJNN6DDFUBDLMFLG52dbF7579416DCFG8B8B18977768759A4RNLBAD9HEICHGHIHHJHGJR-FHQFFHGJIT93VSTGUVKXYTRPJD686DCOFDFEIFBAAAAAAAAB8D7BC8K33333333344644674566554453252244833BDC9FBFFEICBCDDCAAHGGFGE9HDEKB9A523877DA996FCHCGEAFC5C4AA734446449768B9768496B6699666389987793E4555AC4D634453332332233333334625488DA79B5A596F78AA88899898BC9F9A9--87995122222IBJJ9DFDGGIDGHEDD-GDCFDBDEEGGFGCCDCCDIJMJNGIFGFCEDFEEEEFFEFEEJDBECCCC73JJLKMLIIIKLK1163354337AB955F8HBA9AB86AA88988B345544565BCDDHFDIIEHFIHCE9DGH4444454345A88JBCCBBFEFGJ88C8A98999444432A5774455--------o1F22214-42315322332263-421289E659B9A8393 1244NKG-MB64NPKGGLHIOQOWKULFFBCBCOOPEJHHGGFCCBJGMXSNcVIJOFJEDFFBA6882A95B9D8928A8888D959-NcBGLMIDBDHD7DNKE6Ela*TbSiWlHEEHHPFZbEqB**b1iOqGGHDWGKwVCIIHATC9*HSIOUGa*KeNHKpOV*oikZ6CB9*676GFcZa*HkqDImbjlM ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ DISOP:02AL 1-4,331-344,586-589| PSIPRED ccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEEEEEEEcccccccccccccEEEEccccEEEEEccccccHHHHHHHHHHccccccEEEEccEEHHHccHHHHHHHccEEccccccccccHHHHHHcccccccHHHHHHHHHHcccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEcccHHcccHHHHHHHHHHHHHHHccccEEEEEccHHHHHcccEEEEEEccEEEEEccHHHHHHcccHHHHHHHHHHHcc //