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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : cyoB
DDBJ      :cyoB         cytochrome o ubiquinol oxidase, subunit I
Swiss-Prot:CYOB_ECOLI   RecName: Full=Ubiquinol oxidase subunit 1;         EC=1.10.3.-;AltName: Full=Ubiquinol oxidase polypeptide I;AltName: Full=Cytochrome o subunit 1;AltName: Full=Oxidase BO(3) subunit 1;AltName: Full=Cytochrome o ubiquinol oxidase subunit 1;AltName: Full=Ubiquinol oxidase chain A;

Homologs  Archaea  26/68 : Bacteria  603/915 : Eukaryota  54/199 : Viruses  0/175   --->[See Alignment]
f.24.1
:663 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   52->552 1fftA PDBj 0.0 94.6 %
:RPS:PDB   45->552 1ar1A PDBj 3e-65 20.1 %
:RPS:SCOP  44->552 1ar1A  f.24.1.1 * e-108 37.0 %
:HMM:SCOP  43->561 1ocrA_ f.24.1.1 * 5.1e-181 45.3 %
:RPS:PFM   60->484 PF00115 * COX1 7e-88 46.5 %
:HMM:PFM   54->504 PF00115 * COX1 1.4e-156 47.8 441/447  
:BLT:SWISS 1->663 CYOB_ECOLI 0.0 94.6 %
:PROS 280->334|PS00077|COX1_CUB
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67385.1 GT:GENE cyoB GT:PRODUCT cytochrome o ubiquinol oxidase, subunit I GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(542312..544303) GB:FROM 542312 GB:TO 544303 GB:DIRECTION - GB:GENE cyoB GB:PRODUCT cytochrome o ubiquinol oxidase, subunit I GB:NOTE identified by match to protein family HMM PF00115; match to protein family HMM TIGR02843 GB:PROTEIN_ID ACF67385.1 GB:DB_XREF GI:194407166 GB:GENE:GENE cyoB LENGTH 663 SQ:AASEQ MFGKLSLDAVPFHEPIVMVTIAAIIVGGLAILAAITYFGKWTYLWKEWLTSVDHKRLGIMYIIVAIVMLLRGFADAIMMRSQQALASAGEAGFLPPHHYDQIFTAHGVIMIFFVAMPFVIGLMNLVVPLQIGARDVAFPFLNNLSFWFTVVGVILVNLSLGVGEFAQTGWLAYPPLSGIEYSPSVGVDYWIWALQLSGIGTTLTGINFFVTILKMRAPGMTMFKMPVFTWASLCANVLIIASFPILTVTVALLTLDRYLGTHFFTNDMGGNMMMYINLIWAWGHPEVYILILPVFGVFSEIAATFSRKRLFGYTSLVWATVCITVLSFIVWLHHFFTMGAGANVNAFFGITTMIIAIPTGVKIFNWLFTMYQGRIVFHSAMMWTIGFIVTFSVGGMTGVLLAVPGADFVLHNSLFLIAHFHNVIIGGVVFGCFAGMTYWWPKAFGFKLNETWGKRAFWFWIIGFFVAFMPLYVLGFMGMTRRLSQQIDPQFHTMLMVAAAGAALIALGILCQLIQIFVSIRDRDQNRDLTGDPWGGRTLEWSTSSPPPFYNFAVVPHVHERDAFWEMKEKGEAYQQPGQYEEIHMPKNSGAGIVIAAFATVFGFAMIWHIWWLAIVGFAGMIISWIVKSFDEDVDYYVPVPEVEKLENQHFDEITKAGLKNGN GT:EXON 1|1-663:0| SW:ID CYOB_ECOLI SW:DE RecName: Full=Ubiquinol oxidase subunit 1; EC=1.10.3.-;AltName: Full=Ubiquinol oxidase polypeptide I;AltName: Full=Cytochrome o subunit 1;AltName: Full=Oxidase BO(3) subunit 1;AltName: Full=Cytochrome o ubiquinol oxidase subunit 1;AltName: Full=Ubiquinol oxidase chain A; SW:GN Name=cyoB; OrderedLocusNames=b0431, JW0421; SW:KW 3D-structure; Cell inner membrane; Cell membrane; Complete proteome;Copper; Electron transport; Heme; Hydrogen ion transport;Ion transport; Iron; Membrane; Metal-binding; Oxidoreductase;Respiratory chain; Transmembrane; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->663|CYOB_ECOLI|0.0|94.6|663/663| GO:SWS:NREP 12 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0022900|"GO:electron transport chain"|Electron transport| GO:SWS GO:0015992|"GO:proton transport"|Hydrogen ion transport| GO:SWS GO:0006811|"GO:ion transport"|Ion transport| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0070469|"GO:respiratory chain"|Respiratory chain| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 280->334|PS00077|COX1_CUB|PDOC00074| TM:NTM 14 TM:REGION 17->39| TM:REGION 57->79| TM:REGION 106->128| TM:REGION 140->162| TM:REGION 193->214| TM:REGION 232->254| TM:REGION 276->298| TM:REGION 312->334| TM:REGION 345->367| TM:REGION 381->403| TM:REGION 415->437| TM:REGION 456->478| TM:REGION 494->516| TM:REGION 600->622| SEG 19->36|vtiaaiivgglailaait| SEG 498->516|aaagaalialgilcqliqi| BL:PDB:NREP 1 BL:PDB:REP 52->552|1fftA|0.0|94.6|501/501| RP:PDB:NREP 1 RP:PDB:REP 45->552|1ar1A|3e-65|20.1|502/529| RP:PFM:NREP 1 RP:PFM:REP 60->484|PF00115|7e-88|46.5|417/423|COX1| HM:PFM:NREP 1 HM:PFM:REP 54->504|PF00115|1.4e-156|47.8|441/447|COX1| GO:PFM:NREP 5 GO:PFM GO:0005506|"GO:iron ion binding"|PF00115|IPR000883| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00115|IPR000883| GO:PFM GO:0009060|"GO:aerobic respiration"|PF00115|IPR000883| GO:PFM GO:0016021|"GO:integral to membrane"|PF00115|IPR000883| GO:PFM GO:0020037|"GO:heme binding"|PF00115|IPR000883| RP:SCP:NREP 1 RP:SCP:REP 44->552|1ar1A|e-108|37.0|508/529|f.24.1.1| HM:SCP:REP 43->561|1ocrA_|5.1e-181|45.3|512/514|f.24.1.1|1/1|Cytochrome c oxidase subunit I-like| OP:NHOMO 1180 OP:NHOMOORG 683 OP:PATTERN 22----6333333336-12-2---41131111-----------------------------1----11 1242111111111131111-151121111112322325342342111111111111111122213222223------------1-----------------111111121--------------11----------22222---11132211111112122222212534211111111211211111---22222222222222222222222222212242111111114211111111111111111111--------------------------------------------------------------------------------------------------1---------------------1-21223111111243354112232112212222221335435344421322244335454211112133333121111111112331212-111111111111111111111111-111111112-1443543333432333444666664445646551144422322212151321121121-------1233211-----11-1-111-1-1-1111-222222---------------------------2211131111221112221212222211221211-31-111111111111111111111111-1111111111111111111111111111111111111111111111----111111111111111112111111121112111---------------1111111---2122222322222222111-11111111----2-----221113322222222111111--111111----------------------------------------------22- -2------1-----1------------11--11111---------1-1------111-----4-311---1-----3----------------1---11------1------11111-----1-1--1-11--11-----1--11--------1-1--1----2-112--M-14-1---------1--4-----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 518 STR:RPRED 78.1 SQ:SECSTR ############################################TTTTTTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccTTcccccccccccccccHHHHHHHHHHHHHHHHHHHTccccccHHHHHHHHHHHHHHHHHHcEETTTEEccccTTTTcTTTGGHHGccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTccGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccTTcGGGTccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcccTTHHHHHHHHHHHHHHTTccGGGGcGGGTccHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHTTcHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHcEEccHHHHHHHHHHHHHHHHHHHcHHHHHHHTTcccccccccGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcEEcccccccccTTcccGGGTcccccccccccccccHHHHc##################################################################################################### DISOP:02AL 656-656,658-664| PSIPRED ccccccHHHcccccccccccccccHHHHHHHHHHHHHccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccHHHHcccHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccEEccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccEEEccHHHHHHHHHHHHHHcccccHHcccHHHHHHHccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccHHHHcccccccccccccccccccccHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEccHHHHHHHHHHHHHHHHHHcccccc //