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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : cysS
DDBJ      :cysS         cysteinyl tRNA synthetase
Swiss-Prot:SYC_SALTI    RecName: Full=Cysteinyl-tRNA synthetase;         EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase;         Short=CysRS;

Homologs  Archaea  60/68 : Bacteria  906/915 : Eukaryota  190/199 : Viruses  1/175   --->[See Alignment]
a.27.1c.26.1
:461 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->461 1u0bB PDBj 0.0 92.4 %
:RPS:PDB   2->258 3e4cB PDBj 7e-63 12.1 %
:RPS:PDB   294->454 3e98A PDBj 5e-30 19.6 %
:RPS:SCOP  1->315 1li5A2  c.26.1.1 * 5e-54 95.0 %
:RPS:SCOP  316->461 1u0bB1  a.27.1.1 * 3e-42 77.4 %
:HMM:SCOP  1->315 1li5A2 c.26.1.1 * 7.7e-107 40.1 %
:HMM:SCOP  316->461 1u0bB1 a.27.1.1 * 2.1e-48 49.0 %
:RPS:PFM   15->314 PF01406 * tRNA-synt_1e e-117 65.6 %
:RPS:PFM   341->396 PF09190 * DALR_2 4e-15 62.5 %
:HMM:PFM   15->313 PF01406 * tRNA-synt_1e 1.6e-145 54.8 299/301  
:HMM:PFM   341->402 PF09190 * DALR_2 4.7e-27 66.1 62/63  
:BLT:SWISS 1->461 SYC_SALTI 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70231.1 GT:GENE cysS GT:PRODUCT cysteinyl tRNA synthetase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 646368..647753 GB:FROM 646368 GB:TO 647753 GB:DIRECTION + GB:GENE cysS GB:PRODUCT cysteinyl tRNA synthetase GB:NOTE identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435 GB:PROTEIN_ID ACF70231.1 GB:DB_XREF GI:194410012 GB:GENE:GENE cysS LENGTH 461 SQ:AASEQ MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGYKLKYVRNITDIDDKIIKRANENGESFVALVDRMIAEMHQDFDALNILRPDSEPRATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGEYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLKYYDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRLTEMGIILEDGPQGTTWRRK GT:EXON 1|1-461:0| SW:ID SYC_SALTI SW:DE RecName: Full=Cysteinyl-tRNA synthetase; EC=6.1.1.16;AltName: Full=Cysteine--tRNA ligase; Short=CysRS; SW:GN Name=cysS; OrderedLocusNames=STY0585, t2324; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Metal-binding; Nucleotide-binding; Protein biosynthesis; Zinc. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->461|SYC_SALTI|0.0|100.0|461/461| GO:SWS:NREP 7 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 423->442|rldarkakdwaaadaardrl| BL:PDB:NREP 1 BL:PDB:REP 1->461|1u0bB|0.0|92.4|461/461| RP:PDB:NREP 2 RP:PDB:REP 2->258|3e4cB|7e-63|12.1|247/269| RP:PDB:REP 294->454|3e98A|5e-30|19.6|153/176| RP:PFM:NREP 2 RP:PFM:REP 15->314|PF01406|e-117|65.6|299/300|tRNA-synt_1e| RP:PFM:REP 341->396|PF09190|4e-15|62.5|56/65|DALR_2| HM:PFM:NREP 2 HM:PFM:REP 15->313|PF01406|1.6e-145|54.8|299/301|tRNA-synt_1e| HM:PFM:REP 341->402|PF09190|4.7e-27|66.1|62/63|DALR_2| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF01406|IPR015803| GO:PFM GO:0004817|"GO:cysteine-tRNA ligase activity"|PF01406|IPR015803| GO:PFM GO:0005524|"GO:ATP binding"|PF01406|IPR015803| GO:PFM GO:0005737|"GO:cytoplasm"|PF01406|IPR015803| GO:PFM GO:0006412|"GO:translation"|PF01406|IPR015803| GO:PFM GO:0006423|"GO:cysteinyl-tRNA aminoacylation"|PF01406|IPR015803| GO:PFM GO:0000166|"GO:nucleotide binding"|PF09190|IPR015273| GO:PFM GO:0004817|"GO:cysteine-tRNA ligase activity"|PF09190|IPR015273| GO:PFM GO:0005524|"GO:ATP binding"|PF09190|IPR015273| GO:PFM GO:0005737|"GO:cytoplasm"|PF09190|IPR015273| GO:PFM GO:0006412|"GO:translation"|PF09190|IPR015273| GO:PFM GO:0006423|"GO:cysteinyl-tRNA aminoacylation"|PF09190|IPR015273| RP:SCP:NREP 2 RP:SCP:REP 1->315|1li5A2|5e-54|95.0|299/299|c.26.1.1| RP:SCP:REP 316->461|1u0bB1|3e-42|77.4|146/146|a.27.1.1| HM:SCP:REP 1->315|1li5A2|7.7e-107|40.1|314/315|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 316->461|1u0bB1|2.1e-48|49.0|143/0|a.27.1.1|1/1|Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases| OP:NHOMO 1461 OP:NHOMOORG 1157 OP:PATTERN 1111111111111111111111111111111111---11111211--1--111-11111111111111 1112222222232322222-22222222222222222222322322222221222222222231233222211111111111111111111111111--1111111111111111111111111111111111111222221112222111111111111111111111111111111111111111111111211111111111111111111111111111221111111112222222222222211111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111122111111211111211111111111111111121111111111111111111123212211221111111211111111112231111111111111111111111111111111111111111111111111111111111-1111111111121111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111-11111111111111111111111111111111111111111111111211111211111111111111111111111111111111111111111111-11111111111111111111111111111111 1111223-311111111111111111211111122111211111111111111111111111111111-21111121-1111111111-12112111111111111123242424222221222662427K5-323-22232232-21--41142322224513232222212333222K2321243241322322222 --------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- STR:NPRED 461 STR:RPRED 100.0 SQ:SECSTR cHHHHHHHGGGccccccTTTccEEEEEEEccccccccccccTHHHHHHHHHHHHHHTTEEEEEEEcccHHHHHHHHHHHcGGGGGcccEEEEEEEEEETTEEEcTTccTTccEGGGcEEcHHHHHHHHcTTTcGGGTTcccEEEEEEEEcTTTTTTcccHHHcccccccHHHHHccccccEEEEEEcccccccccccTccccccHHHHHHHHHHHTTTccHHHHHHHHHHHTccccccccccEEEcccccccccccTTcccccHHHHHHTTcccccHHHHHTTccHHHHHHHHHTccTTccccccHHHHHHHHHHHHHHHHHHTcccccccHHcTHHHHHHHHHHHHcTccHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHTTTcHHHHHHHHHHTTccccccccccccccccccccccccccccccccccEEEEEc DISOP:02AL 455-462| PSIPRED cEEEEEcccccEEEEEEccccccEEEEEcccccccccccccHHHHHHHHHHHHHHHcccEEEEEEEcccccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHcccEEEcccccEEEEcHHcccccccHHHHHHHHHHHccccccccccccccEEEccccccccccccccccccccccccccHHHHHHHccccccEEccccEEEEccHHHHHHHHHHccccccccEEEEEEEEccccccccccccccccHHHHHHHccHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHccccccHHHHHHcccccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcccEEEEcccccEEEEc //