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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : edd
DDBJ      :edd          phosphogluconate dehydratase
Swiss-Prot:EDD_ECOLI    RecName: Full=Phosphogluconate dehydratase;         EC=4.2.1.12;AltName: Full=6-phosphogluconate dehydratase;

Homologs  Archaea  54/68 : Bacteria  742/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
c.8.2d.334.1
:603 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   98->598 2gp4A PDBj e-142 63.1 %
:RPS:PDB   67->316 2cwlB PDBj 2e-09 12.5 %
:RPS:PDB   322->564 3ckdC PDBj 8e-22 11.4 %
:RPS:SCOP  69->418 2gp4A2  d.334.1.1 * e-100 61.3 %
:RPS:SCOP  419->598 2gp4A1  c.8.2.2 * 4e-40 63.3 %
:HMM:SCOP  1->418 2gp4A2 d.334.1.1 * 3.3e-146 44.0 %
:HMM:SCOP  419->601 2gp4A1 c.8.2.2 * 2.2e-58 47.5 %
:RPS:PFM   68->598 PF00920 * ILVD_EDD 1e-91 45.5 %
:HMM:PFM   66->598 PF00920 * ILVD_EDD 1.4e-170 40.7 511/521  
:BLT:SWISS 1->603 EDD_ECOLI 0.0 91.4 %
:PROS 154->164|PS00886|ILVD_EDD_1
:PROS 505->516|PS00887|ILVD_EDD_2
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66429.1 GT:GENE edd GT:PRODUCT phosphogluconate dehydratase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2026642..2028453) GB:FROM 2026642 GB:TO 2028453 GB:DIRECTION - GB:GENE edd GB:PRODUCT phosphogluconate dehydratase GB:NOTE identified by match to protein family HMM PF00920; match to protein family HMM TIGR01196 GB:PROTEIN_ID ACF66429.1 GB:DB_XREF GI:194406210 GB:GENE:GENE edd LENGTH 603 SQ:AASEQ MNPNLLRVTQRIVERSQQTREAYLARIEQAKTATVHRSQLACGNLAHGFAACQPEDKASLKSMLRNNIAIITSYNDMLSAHQPYEHYPQIIRQALHSVNAVGQVAGGVPAMCDGVTQGQDGMELSLLSREVIAMSAAVGLSHNMFDGALFLGVCDKIVPGLAMAALSFGHLPAIFVPSGPMASGLPNKEKVRIRQLYAEGKVDRMALLESEAASYHAPGTCTFYGTANTNQMVVEFMGMQLPGSSFVHPDAPLREALTAAAARQVTRLTGNGNTWMPLGKMIDEKVVVNGIVALLATGGSTNHTMHLVAMARAAGILINWDDFSDLSEVVPLMARLYPNGPADINHFQAAGGVPVLMRELLNAGLLHEDVNTVAGFGLKRYTLEPWLNNGELDWREGAERSLDNDVIASFDKPFSPHGGTKVLSGNLGRAVMKTSAVPVENQIIEAPAMVFESQHDVLPAFDAGLLDRDCVVVVRHQGPKANGMPELHKLMPPLGVLLDRRFKIALVTDGRLSGASGKVPSAIHVTPEAYDGGLLAKVRDGDIIRVNGQTGELTLLVDEAELAARQPHIPDLSASRVGTGRELFGALREKLSGAEQGATCITF GT:EXON 1|1-603:0| SW:ID EDD_ECOLI SW:DE RecName: Full=Phosphogluconate dehydratase; EC=4.2.1.12;AltName: Full=6-phosphogluconate dehydratase; SW:GN Name=edd; OrderedLocusNames=b1851, JW1840; SW:KW Complete proteome; Lyase. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->603|EDD_ECOLI|0.0|91.4|603/603| GO:SWS:NREP 1 GO:SWS GO:0016829|"GO:lyase activity"|Lyase| PROS 154->164|PS00886|ILVD_EDD_1|PDOC00690| PROS 505->516|PS00887|ILVD_EDD_2|PDOC00690| SEG 251->269|aplrealtaaaarqvtrlt| BL:PDB:NREP 1 BL:PDB:REP 98->598|2gp4A|e-142|63.1|461/509| RP:PDB:NREP 2 RP:PDB:REP 67->316|2cwlB|2e-09|12.5|224/298| RP:PDB:REP 322->564|3ckdC|8e-22|11.4|228/267| RP:PFM:NREP 1 RP:PFM:REP 68->598|PF00920|1e-91|45.5|494/521|ILVD_EDD| HM:PFM:NREP 1 HM:PFM:REP 66->598|PF00920|1.4e-170|40.7|511/521|ILVD_EDD| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00920|IPR000581| GO:PFM GO:0008152|"GO:metabolic process"|PF00920|IPR000581| RP:SCP:NREP 2 RP:SCP:REP 69->418|2gp4A2|e-100|61.3|323/332|d.334.1.1| RP:SCP:REP 419->598|2gp4A1|4e-40|63.3|180/190|c.8.2.2| HM:SCP:REP 1->418|2gp4A2|3.3e-146|44.0|418/0|d.334.1.1|1/1|IlvD/EDD N-terminal domain-like| HM:SCP:REP 419->601|2gp4A1|2.2e-58|47.5|183/0|c.8.2.2|1/1|LeuD/IlvD-like| OP:NHOMO 1745 OP:NHOMOORG 913 OP:PATTERN 11-1--1111111111-11111111--11211111111111111111111211111-----1--1-11 2131211211111121111-121114111111211133332113242-211123111111121-23423211111111-11-111111111112---11--211211212---------------11111111111111111111111111111111111111111121111111111111111111111-11111111111111111121111111111111--1111111211111111111111111112---------------------1-111-------11111111111111-------------111222111-14-23111111111121112---2-1--1211122111111111111--12135444-22-2526771134543333333333225-33433537851-5554536666775522233423444342122222251122111-----------------------------2226222552746656452222557A222223447664512552325336463982211222212232222111311-2212111111111-1111111111111-3111111111112111111111111111222242323-2332322322233332222322-1-121111111122212314222422222-2232222222233223222222211123232323333323222322222221-22222222222211-------111122246111111-111111114444423111422222223322224333311-1-11-1121312222222123222222222222221111111111--------------------------------------1--1-111131 ------1-------134223453464522222222222222222222234334423232222111111111111111-1121111111-22242222222112222--2----------------------------------------------------------------1-1111H1111111342121132332 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 530 STR:RPRED 87.9 SQ:SECSTR ##################################################################cHHHHHHHGGGTTcTTcHHHHHH##HHHHHHHHcccTTTHHHHHTHHHHHHHHHHHHHccccccccEEEEEEccccTTTTHHHHHHHHHHHHHHHHHcTTccccccEEEEEEccccTTcHHHHHHHHHHHHHHHHHTTcTTTHHHHHHGGGccEEEEcccTTTcccccHHHHHHHTTcEEEEcccTTHHHHHHHHcGGGcEEccHHHHcHHHHHHHHHGGcHHHHHHTTTcTTcTTTTHHHHHHHHHccTTcHHHHHHHHHTTccGGGHHHHHHHHTTTTcTTHHHHHHHHHHHHcTTccccHHHHHHHHHHHHHHHHTTEETHHHHHHHHcHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHTcccccTTccHHHHHHHHHHHHHHHHHHHHHHHTcHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcTTcHHHHHHccEEccHHHHHHHHHHHHTTcHHHHTcccGGGTc##### DISOP:02AL 1-1,31-36| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHccccHHccccHHHccccEEEEEEcccccccccccHHHHHHHHHHHHHHccccEEEEccEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccEEEEEccccccHHHHHHHHHHcccccEEEEccccccccccccEEEEHHHHHHcccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHcccccccHHHHccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccHHHHHHHHHcccEEEEEccccHHHHHHHHHcccHHHHHHHHHHcccccccccccccccHHHHHHccccccccEEEcccccccccccccccHHHcccccccEEEEEEccccccEEEEEEccccEEEEEEEEEEccHHHHHHHHHccccccccEEEEEcccccccccccHHHccHHHHHHHHcccEEEEEEccccccccccccEEEEccHHHHccccEEEEEcccEEEEEccccEEEEEccHHHHHHHHHHcccccccccccccHHHHHHHHHcccHHHccEEEEc //