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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : glnS
DDBJ      :glnS         glutaminyl-tRNA synthetase
Swiss-Prot:SYQ_SALTY    RecName: Full=Glutaminyl-tRNA synthetase;         EC=6.1.1.18;AltName: Full=Glutamine--tRNA ligase;         Short=GlnRS;

Homologs  Archaea  68/68 : Bacteria  631/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
b.53.1c.26.1
:555 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   9->549 1euyA PDBj 0.0 96.2 %
:RPS:PDB   10->135 2akeA PDBj 4e-13 12.1 %
:RPS:PDB   161->361 2e3sA PDBj 3e-44 10.1 %
:RPS:PDB   342->523 3b8pB PDBj 1e-48 7.3 %
:RPS:SCOP  9->339 1euqA2  c.26.1.1 * 4e-45 97.6 %
:RPS:SCOP  340->549 1euqA1  b.53.1.2 * 4e-57 91.4 %
:HMM:SCOP  9->337 1gtrA2 c.26.1.1 * 1.1e-104 36.5 %
:HMM:SCOP  340->549 1gtrA1 b.53.1.2 * 3e-84 53.6 %
:RPS:PFM   28->310 PF00749 * tRNA-synt_1c 6e-41 40.2 %
:RPS:PFM   340->529 PF03950 * tRNA-synt_1c_C 6e-63 64.3 %
:HMM:PFM   28->337 PF00749 * tRNA-synt_1c 8.6e-127 43.3 307/314  
:HMM:PFM   340->529 PF03950 * tRNA-synt_1c_C 2e-66 53.5 172/173  
:BLT:SWISS 1->555 SYQ_SALTY 0.0 100.0 %
:PROS 34->45|PS00178|AA_TRNA_LIGASE_I

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68510.1 GT:GENE glnS GT:PRODUCT glutaminyl-tRNA synthetase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 795836..797503 GB:FROM 795836 GB:TO 797503 GB:DIRECTION + GB:GENE glnS GB:PRODUCT glutaminyl-tRNA synthetase GB:NOTE identified by match to protein family HMM PF00749; match to protein family HMM PF03950; match to protein family HMM TIGR00440 GB:PROTEIN_ID ACF68510.1 GB:DB_XREF GI:194408291 GB:GENE:GENE glnS LENGTH 555 SQ:AASEQ MSEAEARPTNFIRQIIDEDLASGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDDTNPVKEDIEYVDSIKNDVEWLGFHWSGDIRYSSDYFDQLHAYAVELINKGLAYVDELTPEQIREYRGTLTAPGKNSPFRDRSVEENLALFEKMRTGGFEEGKACLRAKIDMASPFIVMRDPVLYRIKFAEHHQTGNKWCIYPMYDFTHCISDALEGITHSLCTLEFQDNRRLYDWVLDNITIPVHPRQYEFSRLNLEYTVMSKRKLNLLVTDKHVEGWDDPRMPTISGLRRRGYTAASIREFCKRIGVTKQDNTIEMASLESCIREDLNENAPRAMAVIDPVKLVIENYPQGESEMVTMPNHPNKPEMGSREVPFSGEIWIDRADFREEANKQYKRLVMGKEVRLRNAYVIKAERVEKDAEGNITTIFCTYDADTLSKDPADGRKVKGVIHWVSAAHALPIEIRLYDRLFSVPNPGAAEDFLSVINPESLVIKQGYGEPSLKAAVAGKAFQFEREGYFCLDSRYATADKLVFNRTVGLRDTWAKAGE GT:EXON 1|1-555:0| SW:ID SYQ_SALTY SW:DE RecName: Full=Glutaminyl-tRNA synthetase; EC=6.1.1.18;AltName: Full=Glutamine--tRNA ligase; Short=GlnRS; SW:GN Name=glnS; OrderedLocusNames=STM0686; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->555|SYQ_SALTY|0.0|100.0|555/555| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| PROS 34->45|PS00178|AA_TRNA_LIGASE_I|PDOC00161| BL:PDB:NREP 1 BL:PDB:REP 9->549|1euyA|0.0|96.2|529/529| RP:PDB:NREP 3 RP:PDB:REP 10->135|2akeA|4e-13|12.1|124/373| RP:PDB:REP 161->361|2e3sA|3e-44|10.1|199/224| RP:PDB:REP 342->523|3b8pB|1e-48|7.3|165/173| RP:PFM:NREP 2 RP:PFM:REP 28->310|PF00749|6e-41|40.2|276/309|tRNA-synt_1c| RP:PFM:REP 340->529|PF03950|6e-63|64.3|185/186|tRNA-synt_1c_C| HM:PFM:NREP 2 HM:PFM:REP 28->337|PF00749|8.6e-127|43.3|307/314|tRNA-synt_1c| HM:PFM:REP 340->529|PF03950|2e-66|53.5|172/173|tRNA-synt_1c_C| GO:PFM:NREP 12 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00749|IPR020058| GO:PFM GO:0005524|"GO:ATP binding"|PF00749|IPR020058| GO:PFM GO:0005737|"GO:cytoplasm"|PF00749|IPR020058| GO:PFM GO:0006412|"GO:translation"|PF00749|IPR020058| GO:PFM GO:0016876|"GO:ligase activity, forming aminoacyl-tRNA and related compounds"|PF00749|IPR020058| GO:PFM GO:0043039|"GO:tRNA aminoacylation"|PF00749|IPR020058| GO:PFM GO:0000166|"GO:nucleotide binding"|PF03950|IPR020059| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03950|IPR020059| GO:PFM GO:0005524|"GO:ATP binding"|PF03950|IPR020059| GO:PFM GO:0005737|"GO:cytoplasm"|PF03950|IPR020059| GO:PFM GO:0006412|"GO:translation"|PF03950|IPR020059| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF03950|IPR020059| RP:SCP:NREP 2 RP:SCP:REP 9->339|1euqA2|4e-45|97.6|331/331|c.26.1.1| RP:SCP:REP 340->549|1euqA1|4e-57|91.4|198/198|b.53.1.2| HM:SCP:REP 9->337|1gtrA2|1.1e-104|36.5|329/331|c.26.1.1|1/1|Nucleotidylyl transferase| HM:SCP:REP 340->549|1gtrA1|3e-84|53.6|209/209|b.53.1.2|1/1|Ribosomal protein L25-like| OP:NHOMO 1630 OP:NHOMOORG 895 OP:PATTERN 11111111111111111111111111111111111111111111111111111111111111111111 1221-------------------------------------1---------------------1----1-1-1--------111111111111211-111111111-111---------------111-1---11-1--1------11111111111111-21111-1111-1111--1-1112111111--1-----------------1-------1----11-1111-12------------------1---1----1-----11--1111--1------------------------------------1----------1111-----------21111111-1---112-2212121-1-11111--212122-22222323333333333222222222222-22-22-21322-1221211121-1222322222222222111111111332211222221222122222112222212212222-1132212222222222222222222222222222121122111111111111212222222222222222322222222212222222222222222222111121221111111111111111111111112--222111222122222222222222122222112111122122222222222222222222-222222222222222222222222222221222222222222222222222312222222222221122111112222112112222222222222222221222111131111322223332122222222222222222222222223221222221112222221111------------1-21211---------------1----12-11211111-13 2222221-62222222222222232343322223332222222222222222222223222322222222222222212222222222-24222222222222223224243422352222222231326G2-2362222322222222222262222236E22233212322222222e2223234572344332223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 542 STR:RPRED 97.7 SQ:SECSTR ########cHHHccTTcEEEEccccEccEEEEcccTTccccHHHHHHHHHHHHHHHHTTcEEEEEEcccccccccHHHHHHHHHHHHHTTccccEEEEEGGGcHHHHHHHHHHHHHTTcEEEEcccHHHHHHHHHHHHHHTcccccccTTTTccEEEHHHHHHHHHHHHHHHHHTTccccccEEEETTEEEEEcccEETTEEcccEEEEEEEETcHHHHHHHHcGGGcccEEEEEEEEEEETTEEEEEEcccccEEEEEEEEEccccTTcccEEccEEEEEEcccTTccccccEEcEEEEEEEEEEEEcccGGGEEEEEEEEEEEEccccccHHHHHccEEEEEEEEEcccHHHHHHHHTcHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccTTcccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHTcTTTTTcHHHHccTGGGHHHHHHHHHHccccTTcTTcccccEEEcccccccccHHHHHHHHTccccTTTcEEEEEccccc##### DISOP:02AL 1-5,8-9,132-141,549-549,552-556| PSIPRED ccccccccHHHHHHHHHHHcccccccEEEEEccccccccccHHHHHHHHHHHHHHHHHccEEEEEEEccccccccHHHHHHHHHHHHHHcccccccEEEccccHHHHHHHHHHHHHcccEEEEcccHHHHHHHHHHHHHcccccccccccHHHcHHHHHHHHccccccccEEEEEEcccccccEEEEccEEEEEEEccccccccccccccHHHccEEEEHHHccccEEEEccHHHcccHHHHHHHHHcccccccEEEEEEEEcccccEEEEccHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHcccccccEEEHHHHHHHHHHHcccccccccEEEccEEEEEEccccccEEEEEcccccccHHHcEEEEEEccEEEEEHHHcccccHHHHHHcccccEEEEEccEEEEEEEEEEcccccEEEEEEEEcHHHcccccccccccccEEEEEcccccEEEEEEEcccccccccccccccHHHHcccccEEEEEEEEccHHHHcccccEEEEEEEEEEEEcccccccccEEEEEEEEccccHHHccc //