[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : gudP
DDBJ      :gudP         glucarate permease
Swiss-Prot:GUDP_ECOLI   RecName: Full=Probable glucarate transporter;AltName: Full=D-glucarate permease;

Homologs  Archaea  30/68 : Bacteria  515/915 : Eukaryota  164/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:452 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->317 1pw4A PDBj 3e-09 21.8 %
:RPS:PDB   66->203 2d33D PDBj 5e-06 5.3 %
:RPS:SCOP  18->437 1pw4A  f.38.1.1 * 2e-23 20.4 %
:HMM:SCOP  1->445 1pw4A_ f.38.1.1 * 4e-88 25.2 %
:RPS:PFM   35->396 PF07690 * MFS_1 2e-27 32.3 %
:HMM:PFM   25->318 PF07690 * MFS_1 8.4e-52 27.7 267/353  
:HMM:PFM   325->435 PF07690 * MFS_1 2.7e-10 20.0 110/353  
:BLT:SWISS 1->450 GUDP_ECOLI 0.0 96.7 %
:TM

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67592.1 GT:GENE gudP GT:PRODUCT glucarate permease GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(3095876..3097234) GB:FROM 3095876 GB:TO 3097234 GB:DIRECTION - GB:GENE gudP GB:PRODUCT glucarate permease GB:NOTE identified by match to protein family HMM PF00083; match to protein family HMM PF07690; match to protein family HMM TIGR00893 GB:PROTEIN_ID ACF67592.1 GB:DB_XREF GI:194407373 GB:GENE:GENE gudP LENGTH 452 SQ:AASEQ MSSLSHAASSAEKRTNARYWIVVMLFIVTSFNYGDRATLSIAGSEMAKDIGLDPVGMGYVFSAFSWAYVIGQIPGGWLLDRFGSKRVYFWSIFIWSVFTLLQGFVDIFSGFGIIVALFTLRFLVGLAESPSFPGNSRIVAAWFPAQERGTAVAIFNSAQYFATVIFAPIMGWLTHEVGWSHVFFFMGGLGIIISFIWLKVIHEPNNHPGVNKKELEYIAEGGALINMDQKDTKAKVPFSVKWGQIKQLLGSRMMIGVYIGQYCINALTYFFITWFPVYLVQARGMSILKAGFVASVPAVCGFIGGVLGGIISDWLMRRTGSLNIARKTPIVLGMLLSMVMVFCNYVNVEWMIIGFMALAFFGKGIGALGWAVMADTAPKEISGLSGGLFNMFGNISGIVTPIAIGYIVGTTGSFNGALIYVGVHALVAIISYLVLVGDIKRIELKPVAGQLS GT:EXON 1|1-452:0| SW:ID GUDP_ECOLI SW:DE RecName: Full=Probable glucarate transporter;AltName: Full=D-glucarate permease; SW:GN Name=gudP; Synonyms=ygcZ; OrderedLocusNames=b2789, JW2760; SW:KW Cell inner membrane; Cell membrane; Complete proteome; Membrane;Transmembrane; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->450|GUDP_ECOLI|0.0|96.7|450/450| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 11 TM:REGION 20->42| TM:REGION 51->73| TM:REGION 98->120| TM:REGION 151->173| TM:REGION 180->202| TM:REGION 254->276| TM:REGION 290->312| TM:REGION 328->350| TM:REGION 353->375| TM:REGION 385->407| TM:REGION 417->439| BL:PDB:NREP 1 BL:PDB:REP 18->317|1pw4A|3e-09|21.8|275/434| RP:PDB:NREP 1 RP:PDB:REP 66->203|2d33D|5e-06|5.3|132/499| RP:PFM:NREP 1 RP:PFM:REP 35->396|PF07690|2e-27|32.3|325/347|MFS_1| HM:PFM:NREP 2 HM:PFM:REP 25->318|PF07690|8.4e-52|27.7|267/353|MFS_1| HM:PFM:REP 325->435|PF07690|2.7e-10|20.0|110/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 18->437|1pw4A|2e-23|20.4|397/434|f.38.1.1| HM:SCP:REP 1->445|1pw4A_|4e-88|25.2|425/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 3722 OP:NHOMOORG 709 OP:PATTERN ------1-2222223-1------2----1-----11112111-3--11--111--2--1--232---- 54H--11-11212-1--11-1---1511111--111-669----12--111-1161-111--111-A13-------------11---1442211-----1-2-1-1-5-9111111111111112-------1------11111-----1----------------------------------------13-3444443445544324--77-4342--23-1---111-41223333333333233332121--12212-----1132111---------1------------------------------------1------121111111-1--1111111----------95-231-2-3-------1-1C66B-----71958--11811144344344434-23D11J3I113-8114121411-162422--1-------525555551661-111------------1-11-1111111------24C4-21-12SZeccRE7554WWaX777739THQDMG9-1GCB--31153116343-----34----------2-1-111----12-----2-22113-111-12212-----11---------------11-11--71-1--621------12----1-1--1--------------96953726569778778-5868985887578AA6AA9HLI86213F7BBDBEEECA9C9BAI5216666--577777776777----232333453--11----211-11-----2DDB9C3911-A176656EBH2DEHH-A99221212212--11133333121112234344333--------111111-----1------------------------------1----11-11-31 --11121-------169683895C5B71-1-112-422231212133434AAKJ46B123-13---1111----2-----1---2-21-4759552422-1-1122-251fCBBCA874637A5MC2E6MwB-F9K5544F38C746436C53F55756BGH6CRGAaEFidgJ42953W4557946BB483112333- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 278 STR:RPRED 61.5 SQ:SECSTR #################HHHHHHHHHHHHHHHHHHHTcHHHHHHHTTcc#TTccccHHHHHHHHHEcTTcccGGGcTTcccccTTccccccHHHHHHHHHHHHHcccHHHH##ccHHTTccEETTEEccccccccccGGGccccEEEEccccTTccHHHHHHHHcccEEEEEEEEccTTcTTcccHHHHHHHHHHHHHHHHccccTTTcccccT#############TTcccccTHHH######HHHTcccHHHHHHHHHHHHHHHHHHHHHHHHHHHcTTcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHTcT####################################################################################################################################### DISOP:02AL 1-15,222-240,447-453| PSIPRED cccccccHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc //