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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : hycB
DDBJ      :hycB         formate hydrogenlyase, subunit B
Swiss-Prot:HYCB_SHIFL   RecName: Full=Formate hydrogenlyase subunit 2;         Short=FHL subunit 2;AltName: Full=Hydrogenase-3 component B;

Homologs  Archaea  51/68 : Bacteria  325/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:202 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->179 1kqfB PDBj 7e-10 34.5 %
:RPS:PDB   48->107 1bc6A PDBj 9e-09 28.3 %
:RPS:SCOP  4->184 1ti2B2  d.58.1.5 * 2e-25 26.5 %
:HMM:SCOP  1->182 1q16B_ d.58.1.5 * 3.6e-40 39.2 %
:HMM:PFM   8->22 PF00037 * Fer4 8.4e-06 46.7 15/24  
:HMM:PFM   59->68 PF00037 * Fer4 0.00017 70.0 10/24  
:HMM:PFM   76->98 PF00037 * Fer4 4.3e-10 43.5 23/24  
:HMM:PFM   154->164 PF00037 * Fer4 0.00032 54.5 11/24  
:BLT:SWISS 1->202 HYCB_SHIFL e-105 96.5 %
:PROS 82->93|PS00198|4FE4S_FER_1
:REPEAT 2|39->68|75->97
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69638.1 GT:GENE hycB GT:PRODUCT formate hydrogenlyase, subunit B GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2972884..2973492) GB:FROM 2972884 GB:TO 2973492 GB:DIRECTION - GB:GENE hycB GB:PRODUCT formate hydrogenlyase, subunit B GB:NOTE identified by match to protein family HMM PF00037 GB:PROTEIN_ID ACF69638.1 GB:DB_XREF GI:194409419 GB:GENE:GENE hycB LENGTH 202 SQ:AASEQ MNRFVIADSTLCIGCHTCEAACSETHRQHGLQSMPRLKVMLNEKESAPQLCHHCEDAPCATVCPVNAINRVDGAVQLNESLCVSCKLCGIACPFGAIEFSGSRPLHIPANANTPKAPPAPPAPARVSTLLDWVPGVRAIAVKCDLCSFDEQGPACVRMCPTKALHLVDNTDIARASKRKRELTFNTDFGDLTLFQQAQSGDA GT:EXON 1|1-202:0| SW:ID HYCB_SHIFL SW:DE RecName: Full=Formate hydrogenlyase subunit 2; Short=FHL subunit 2;AltName: Full=Hydrogenase-3 component B; SW:GN Name=hycB; OrderedLocusNames=SF2741, S2933; SW:KW 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur;Metal-binding; Repeat; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->202|HYCB_SHIFL|e-105|96.5|202/203| GO:SWS:NREP 5 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0022900|"GO:electron transport chain"|Electron transport| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 82->93|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|39->68|75->97| SEG 108->124|panantpkappappapa| BL:PDB:NREP 1 BL:PDB:REP 6->179|1kqfB|7e-10|34.5|139/289| RP:PDB:NREP 1 RP:PDB:REP 48->107|1bc6A|9e-09|28.3|60/77| HM:PFM:NREP 4 HM:PFM:REP 8->22|PF00037|8.4e-06|46.7|15/24|Fer4| HM:PFM:REP 59->68|PF00037|0.00017|70.0|10/24|Fer4| HM:PFM:REP 76->98|PF00037|4.3e-10|43.5|23/24|Fer4| HM:PFM:REP 154->164|PF00037|0.00032|54.5|11/24|Fer4| RP:SCP:NREP 1 RP:SCP:REP 4->184|1ti2B2|2e-25|26.5|147/195|d.58.1.5| HM:SCP:REP 1->182|1q16B_|3.6e-40|39.2|143/509|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 1425 OP:NHOMOORG 377 OP:PATTERN --111111333333314-3332262111---21-433333233-1--13-21212115262---3--- -441----------------------------------1-----------------------11-----1---------3PD123111-------------------------------------2242323332322211111-1------------------------------------------1-----------------------------------1------1-------------------------------------------------------------------------------------------133-21111111-1--211-111--1--6----YY3223-4A91113----51-----------1--1---31--------------1111111111------------1------21--1--212--------1----5-3-------------------------------111--11-1---1-------1111------1-111111111123-22-212211112-1--1----------531-38-5564345335-54452562-3131112127422111111-1-------2A3221153---------45765-3976578487794----531------638575-BBBABA9ABB-ABACAAABABBABABBBB666653--4A8AAAAAAAA99A9A94586999A--244444444444----------------1-222121122121-12----------1----------------------------23331111124223--------------112--------------------------------------------11--1-111-1- --------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 164 STR:RPRED 81.2 SQ:SECSTR ###EEEEccccccHHHHHHHHHHHHHTcTTGGTTccEEEEcTTcccHccTTTTccccccTTTcTTccEEEccccEEEcTTTccccccHHHHcGGGccEETTTccHHH#############TTTTEE####GGGccGGGTHHHHHHHHHHTTcccccccccccTTHHHHTTcccGGGGcccccEE################## DISOP:02AL 197-203| PSIPRED cccEEEEEccccccccHHHHHHHHHHccccccEEEEEEEEEcccEEccHHcccccccHHHHHccccccEEccccEEEcHHHcccccccHHHcccccEEEcccccccHHccccccccccccccccccccccccccccccEEEEccccccccccccHHHHcccccEEEEEHHHHHHHHHHHHHHHHcccccccEEccHHccccc //