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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : hycF
DDBJ      :hycF         formate hydrogenlyase, subunit F
Swiss-Prot:HYCF_ECOLI   RecName: Full=Formate hydrogenlyase subunit 6;         Short=FHL subunit 6;AltName: Full=Hydrogenase-3 component F;

Homologs  Archaea  44/68 : Bacteria  469/915 : Eukaryota  83/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:180 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   18->107 2fug9 PDBj 2e-15 45.6 %
:RPS:PDB   36->99 1bluA PDBj 2e-08 23.4 %
:RPS:SCOP  18->107 2fug91  d.58.1.5 * 3e-15 40.0 %
:HMM:SCOP  18->118 2fug91 d.58.1.5 * 1.9e-28 35.6 %
:HMM:PFM   34->56 PF00037 * Fer4 3.7e-10 43.5 23/24  
:HMM:PFM   70->91 PF00037 * Fer4 8.2e-12 50.0 22/24  
:BLT:SWISS 1->178 HYCF_ECOLI e-102 96.1 %
:PROS 40->51|PS00198|4FE4S_FER_1
:PROS 75->86|PS00198|4FE4S_FER_1
:REPEAT 2|36->69|71->102

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67508.1 GT:GENE hycF GT:PRODUCT formate hydrogenlyase, subunit F GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2967853..2968395) GB:FROM 2967853 GB:TO 2968395 GB:DIRECTION - GB:GENE hycF GB:PRODUCT formate hydrogenlyase, subunit F GB:NOTE identified by match to protein family HMM PF00037 GB:PROTEIN_ID ACF67508.1 GB:DB_XREF GI:194407289 GB:GENE:GENE hycF LENGTH 180 SQ:AASEQ MFTFIKKVIKTGTATSSYPLEPIAVDKNFRGKPEHNPQQCIGCAACVNACPSNALTVETLLATNELAWQFNLGRCIFCGRCEEVCPTAAIKLSQEYELAVWKKEDFLQQSRFALCNCRVCNRPFAVQKEIDYAIALLAHNGDSRAENHRESFETCPDCKRQKCLVPSDRIELTRHMKEVS GT:EXON 1|1-180:0| SW:ID HYCF_ECOLI SW:DE RecName: Full=Formate hydrogenlyase subunit 6; Short=FHL subunit 6;AltName: Full=Hydrogenase-3 component F; SW:GN Name=hycF; Synonyms=hevF; OrderedLocusNames=b2720, JW2690; SW:KW 4Fe-4S; Complete proteome; Electron transport; Iron; Iron-sulfur;Metal-binding; Repeat; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->178|HYCF_ECOLI|e-102|96.1|178/180| GO:SWS:NREP 5 GO:SWS GO:0051539|"GO:4 iron, 4 sulfur cluster binding"|4Fe-4S| GO:SWS GO:0022900|"GO:electron transport chain"|Electron transport| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 40->51|PS00198|4FE4S_FER_1|PDOC00176| PROS 75->86|PS00198|4FE4S_FER_1|PDOC00176| NREPEAT 1 REPEAT 2|36->69|71->102| BL:PDB:NREP 1 BL:PDB:REP 18->107|2fug9|2e-15|45.6|90/154| RP:PDB:NREP 1 RP:PDB:REP 36->99|1bluA|2e-08|23.4|64/80| HM:PFM:NREP 2 HM:PFM:REP 34->56|PF00037|3.7e-10|43.5|23/24|Fer4| HM:PFM:REP 70->91|PF00037|8.2e-12|50.0|22/24|Fer4| RP:SCP:NREP 1 RP:SCP:REP 18->107|2fug91|3e-15|40.0|90/154|d.58.1.5| HM:SCP:REP 18->118|2fug91|1.9e-28|35.6|101/0|d.58.1.5|1/1|4Fe-4S ferredoxins| OP:NHOMO 790 OP:NHOMOORG 596 OP:PATTERN --211111111111113-------11111211---------1-1-11211122-21132331111--- 122-1---------11211-11--11111111111111111111-1--1-----------11111-11111--------21----------1----1--------22-11--------------1----1---11----1111-1111111111111111111111111-111111111111111111--1-1-111111111111111------1-1111----------11------------------------------------------------------------------------------------------1---1----------2-------1-1--1----11-1----22--21---13----111111--1111112422211111111111-22122111111111111111111111111211111111111111111222-1-13111111111-11--111-1---11-111111111------111111111111111111111111----11---11-111-131-111-----1---------1--1----2-1-22-111-331132414-11----2-22112222211-111111114412--221--------------------11---121--1---11111122222213332322233-3333322333323333333222211122222222222222222233222331-211111111111111-------------1-----1----------11111111111-1111111111111-111---------1----------------------------11--111111-------------------------------------1---------3- -----11-----11-1--1-111111111111111111-11111-1-111-111-11111-1-----------1---------------121-111---1-1-112-1----------------------1---------3-----------------1---1111111-------111G11-11-1-21--1111111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 149 STR:RPRED 82.8 SQ:SECSTR ##############HHHTTcTTcHHHHHHHHHHEEEcTTcccccTTGGGcTTccEEEccccEEEcGGGccTTTTTccccHHHHHcTTccEEEcTTcccccTTccccEEcccccccccEEEcTTcTTHHHHcTTGGGTTcEccccccHHHHHHHHHHHHHHHHG################# DISOP:02AL 179-181| PSIPRED cHHHHHHHHcccccEEcccccccccccccccEEEEcHHHcccccHHHHHcccccEEEcccccccccEEEEcHHHcccHHHHHHHcccccEEEEEcccccccHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccccHHHHHHHHHHcccccccHHcccccccEEEcccEEcc //