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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : imp
DDBJ      :imp          LPS-assembly protein
Swiss-Prot:LPTD_SALTY   RecName: Full=LPS-assembly protein lptD;AltName: Full=Organic solvent tolerance protein;Flags: Precursor;

Homologs  Archaea  0/68 : Bacteria  415/915 : Eukaryota  2/199 : Viruses  0/175   --->[See Alignment]
c.47.1f.4.3
:786 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   217->345 1a23A PDBj 6e-04 8.7 %
:RPS:SCOP  217->347 1a2jA  c.47.1.13 * 3e-04 8.5 %
:RPS:SCOP  504->693 1t16A  f.4.3.4 * 3e-04 13.9 %
:RPS:PFM   49->194 PF03968 * OstA 6e-13 38.9 %
:RPS:PFM   310->697 PF04453 * OstA_C 3e-79 49.9 %
:HMM:PFM   308->699 PF04453 * OstA_C 7.2e-109 36.4 376/382  
:HMM:PFM   7->194 PF03968 * OstA 8.8e-42 39.0 141/145  
:BLT:SWISS 1->786 LPTD_SALTY 0.0 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF69433.1 GT:GENE imp GT:PRODUCT LPS-assembly protein GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(101210..103570) GB:FROM 101210 GB:TO 103570 GB:DIRECTION - GB:GENE imp GB:PRODUCT LPS-assembly protein GB:NOTE identified by match to protein family HMM PF03968; match to protein family HMM PF04453 GB:PROTEIN_ID ACF69433.1 GB:DB_XREF GI:194409214 GB:GENE:GENE imp LENGTH 786 SQ:AASEQ MKKRIPTLLATMIASALYSHQGLAADLASQCMLGVPSYDRPLVKGDTNDLPVTINADNAKGNYPDDAVFTGNVDIMQGNSRLQADEVQLHQKQAEGQPEPVRTVDALGNVHYDDNQVILKGPKGWANLNTKDTNVWEGDYQMVGRQGRGKADLMKQRGENRYTILENGSFTSCLPGSDTWSVVGSEVIHDREEQVAEIWNARFKVGPVPIFYSPYLQLPVGDKRRSGFLIPNAKYTTKNYFEFYLPYYWNIAPNMDATITPHYMHRRGNIMWENEFRYLTQAGEGVMELDYLPSDKVYEDDHPKEGDKHRWLFYWQHSGVMDQVWRFNVDYTKVSDSSYFNDFDSKYGSSTDGYATQKFSVGYAVQNFDATVSTKQFQVFNDQNTSSYSAEPQLDVNYYHNDLGPFDTRIYGQAVHFVNTKDNMPEATRVHLEPTINLPLSNRWGSLNTEAKLMATHYQQTNLDSYNSDPNNKNKLEDSVNRVMPQFKVDGKLIFERDMAMLAPGYTQTLEPRVQYLYVPYRDQSGIYNYDSSLLQSDYNGLFRDRTYGGLDRIASANQVTTGVTTRIYDDAAVERFNVSVGQIYYFTESRTGDDNIKWENDDKTGSLVWAGDTYWRISERWGLRSGVQYDTRLDSVATSSSSLEYRRDQDRLVQLNYRYASPEYIQATLPSYYSTAEQYKNGINQVGAVASWPIADRWSIVGAYYFDTNSSKPADQMLGLQYNSCCYAIRVGYERKLNGWDNDKQHAIYDNAIGFNIELRGLSSNYGLGTQEMLRSNILPYQSSM GT:EXON 1|1-786:0| SW:ID LPTD_SALTY SW:DE RecName: Full=LPS-assembly protein lptD;AltName: Full=Organic solvent tolerance protein;Flags: Precursor; SW:GN Name=lptD; Synonyms=imp, ostA; OrderedLocusNames=STM0093; SW:KW Cell membrane; Cell outer membrane; Complete proteome; Membrane;Signal. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->786|LPTD_SALTY|0.0|100.0|786/786| GO:SWS:NREP 3 GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0009279|"GO:cell outer membrane"|Cell outer membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| RP:PDB:NREP 1 RP:PDB:REP 217->345|1a23A|6e-04|8.7|127/189| RP:PFM:NREP 2 RP:PFM:REP 49->194|PF03968|6e-13|38.9|131/159|OstA| RP:PFM:REP 310->697|PF04453|3e-79|49.9|369/378|OstA_C| HM:PFM:NREP 2 HM:PFM:REP 308->699|PF04453|7.2e-109|36.4|376/382|OstA_C| HM:PFM:REP 7->194|PF03968|8.8e-42|39.0|141/145|OstA| GO:PFM:NREP 3 GO:PFM GO:0010033|"GO:response to organic substance"|PF04453|IPR007543| GO:PFM GO:0016044|"GO:cellular membrane organization"|PF04453|IPR007543| GO:PFM GO:0019867|"GO:outer membrane"|PF04453|IPR007543| RP:SCP:NREP 2 RP:SCP:REP 217->347|1a2jA|3e-04|8.5|129/188|c.47.1.13| RP:SCP:REP 504->693|1t16A|3e-04|13.9|187/427|f.4.3.4| OP:NHOMO 425 OP:NHOMOORG 417 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------11111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------1111112211111111111111111111-11111111111-1111111111111111111-1111111111111111-----11-----------------------------1--1111111111111111111112211111111111111111111111111111111111111111111111111111111111--11111111111111------111--11------111111111--11111111111111111111111111111111111--11111------11111111111111111-11111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111-111111112211211211111111111111111111111111111111-------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 252 STR:RPRED 32.1 SQ:SECSTR ##################################################################################################HHHHTTTTccccEEcccccE######EEcccccccccEEEEcccEEEEEEEcTTccEEEccccGGGTTTcEEEEEccccEEEEEcccccccccccccccTTccccccccccHHHHHTTcccccccEEEcccccTTccTEEEEccTTcHHHHHHHTTccHHHHHHHTccTTccEEEEccccccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTcccccEcHHHHHHHHHHTTccHHHHHHHHHcccEEEEccccc############################################################################################################################################################################################################################################################################################################################################################################################################################################## DISOP:02AL 1-3,37-48,784-787| PSIPRED cccHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccEEEEEEEEEEEEcccEEEEEEEEEEEEccEEEEEEEEEEEEEccccccccEEEEEEEccEEEEcccEEEEEEEEEEEEEccEEEEEEEEEEEEccccEEEEEEEEEEccccEEEEEEEEEEcccccccEEEEEEEEEEEEccccEEEEEccEEEEccEEEEEEcEEEEEEccccccEEEEEEEEcccccEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccEEEEEEccccEEEEEEEEEccccccccccccccccEEEEEEEcccccccccEEEEEEEEEEccHHHHHHHcccccccccEEEEEEEEEEEEcccEEEEEEEEEEEEEccccccccEEEEEEEEEEEEcccccEEEEEEEEEEEEEEccccccEEEEEEEEEEEEEEEccccEEEEEEEEEEEEEEEEEccccccccccccccccccEEEEEEEEEEEEEEEEEEEEHHccccEEEEEEEEEEEEEEEccccccccccccEEEEEcccccEEccccccccEEccccEEEEEEEEEEEccccEEEEEEEEEEEEEEccccccccccccccccccccEEEEEEEEEEEcccEEEEEEEEEEcccccEEEEEEEEEEEcccccEEEEEEEEEccccccccccccccccccccccEEEEEEEEEEEccccEEEEEEEEEccccccEEEEEEEEEEEcccEEEEEEEEEEEccccccccccccccEEEEEEEEEcccccccccHHHHHHHccccccccc //