[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : kpdC
DDBJ      :kpdC         4-hydroxybenzoate decarboxylase, subunit C
Swiss-Prot:             

Homologs  Archaea  62/68 : Bacteria  456/915 : Eukaryota  28/199 : Viruses  0/175   --->[See Alignment]
b.45.1d.333.1
:475 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->462 2idbA PDBj 1e-38 30.7 %
:RPS:SCOP  3->309 2idbA1  b.45.1.3 * 1e-78 30.1 %
:RPS:SCOP  314->471 2idbA2  d.333.1.1 * 2e-37 26.8 %
:HMM:SCOP  3->309 2idbA1 b.45.1.3 * 2e-83 37.1 %
:HMM:SCOP  311->474 2idbA2 d.333.1.1 * 2e-39 33.5 %
:RPS:PFM   10->418 PF01977 * UbiD 1e-61 38.0 %
:HMM:PFM   10->418 PF01977 * UbiD 3.9e-117 36.8 402/407  
:BLT:SWISS 1->474 VDCC_STRD7 0.0 68.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70121.1 GT:GENE kpdC GT:PRODUCT 4-hydroxybenzoate decarboxylase, subunit C GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 3038380..3039807 GB:FROM 3038380 GB:TO 3039807 GB:DIRECTION + GB:GENE kpdC GB:PRODUCT 4-hydroxybenzoate decarboxylase, subunit C GB:NOTE identified by match to protein family HMM PF01977; match to protein family HMM TIGR00148 GB:PROTEIN_ID ACF70121.1 GB:DB_XREF GI:194409902 GB:GENE:GENE kpdC LENGTH 475 SQ:AASEQ MAFDDLRSFLHALDQQGQLLKISEEVNAEPDLAAAANATGRIGDGAPALWFDNIRGFTDARVAMNTIGSWQNHAISLGLPPNTPVKKQIDEFIRRWDNFPVAPERRANPGWAENTVDGDAINLFDILPLFRLNDGDGGFYLDKACVVSRDPLDPDNFGKQNVGIYRMEVKGKRKLGLQPVPMHDIALHLHKAEERGEDLPIAITLGNDPIITLMGATPLKYDQSEYEMAGALRESPYPIATAPLTGFDVPWGSEVILEGVIESRKREIEGPFGEFTGHYSGGRNMTVVRIDKVSYRSKPIFESLYLGMPWTEIDYLMGPATCVPLYQQLKAEFPEVQAVNAMYTHGLLAIISTKKRYGGFARAVGLRAMTTPHGLGYVKMVIMVDEDVDPFNLPQVMWALSSKVNPAGDLVQLPNMSVLELDPGSSPAGITDKLIIDATTPVAPDNRGHYSQPVVDLPETKAWAEKLTAMLVNRK GT:EXON 1|1-475:0| BL:SWS:NREP 1 BL:SWS:REP 1->474|VDCC_STRD7|0.0|68.9|473/474| SEG 33->38|aaaana| BL:PDB:NREP 1 BL:PDB:REP 3->462|2idbA|1e-38|30.7|437/463| RP:PFM:NREP 1 RP:PFM:REP 10->418|PF01977|1e-61|38.0|395/405|UbiD| HM:PFM:NREP 1 HM:PFM:REP 10->418|PF01977|3.9e-117|36.8|402/407|UbiD| RP:SCP:NREP 2 RP:SCP:REP 3->309|2idbA1|1e-78|30.1|299/308|b.45.1.3| RP:SCP:REP 314->471|2idbA2|2e-37|26.8|157/166|d.333.1.1| HM:SCP:REP 3->309|2idbA1|2e-83|37.1|299/0|b.45.1.3|1/1|FMN-binding split barrel| HM:SCP:REP 311->474|2idbA2|2e-39|33.5|164/0|d.333.1.1|1/1|UbiD C-terminal domain-like| OP:NHOMO 683 OP:NHOMOORG 546 OP:PATTERN 2212121222222112122222211----1-1111111111111111111111111121111212-22 111-4---------1-1-----------------------1121----------------21----1111-------------11111-----------------1---111111111111111--------------------1-1-1111111111111111111111--111---1-11-11111-----1---------------1111-1----1-----------11----------------------1--------11---11-1---------------------------------------------------11-------------------------1--11--11211-22-------1111111-------2----112111--11-111112---1--2-12-1--111--211-23----11-21111----------------112111-------1111111111111111111--11--111111112111111122421111112172231--11111-11---1--11-1---111111111111611--11-111121111-2222223221111---111111111111111111111111111111111111-111111111111111111111---1111------22111111221111121-211222122221211111233221111222222222212222211122221112111111111111111-----11111111-111-1-1----1111----------1122122121111111111----------11111111111111----------------1-111111----------------------------------------------1-- ------------------1--1-2321-------------------1--22335----------1----------111111111-------------21----------------------------------------------------------------1--------------------1-----------11- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 437 STR:RPRED 92.0 SQ:SECSTR ##cccHHHHHHHHHHTTcEEEEcccccTcTHHHHHHHHHHTTc##ccEEEEcccTTccc##EEEcTTccHHHHH###TTcccGGGHHHHHHHHHcccTTcccccEEEcccGGcEEEEGGGccG#GGccccccTT#ccccEEcccEEEEEcc####ccccEEEEcccEEEccccEE#EccccccHHHHHHHHHHcTTccEEEEEEEcccHHHHHHHHccccTTccHHHHHHHHHccccEEEEccccccEEETTccEEEEEEEEEEEEEEEccEEcTTccEEccEEEEEEEEEEEEEcTTccEEcccccccccH#HHHHHHHHHHHHHHHHHHHcTTEcGGGTTTc###EEEEEEccccTTHHHHHHHHHccGGG###cccEEEEEETTccTTcHHHHHHHHHHc#cHHHHEEEEEEEEccTTcTTcccTTEEEE#EEEccccccTTccccccccccccHHHHH############# DISOP:02AL 1-1,474-476| PSIPRED cccHHHHHHHHHHHHcccEEEEEccccccccHHHHHHHHHHcccccccEEEEccccccccEEEEEccccHHHHHHHccccccHHHHHHHHHHHHHHHccccccEEccccccEEEEEEcccccHHHHcccccccccccHHHccccEEEEEcccccccccccEEEEEEEEEEcccEEEEEEEccccHHHHHHHHHHccccccEEEEEcccHHHHHHHcccccccccHHHHHHHHccccEEEEEcccccccccccccEEEEEEEccccEEcccccccccccccccccccEEEEEEEEEEcccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEEccccHHHHHHHHHHHHHcccccccEEEEEEEccccccccHHHHHHHHHHcccccccEEEEcccccccccccccccccccEEEEEccccccccccccccccccccHHHHHHHHHHHHHHHccc //