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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : ncs1
DDBJ      :ncs1         NCS1 nucleoside transporter family
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  194/915 : Eukaryota  98/199 : Viruses  0/175   --->[See Alignment]
:484 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   82->418 2jloA PDBj 1e-23 28.0 %
:RPS:PFM   22->440 PF02133 * Transp_cyt_pur 6e-48 34.0 %
:HMM:PFM   19->457 PF02133 * Transp_cyt_pur 3.5e-137 36.1 429/439  
:BLT:SWISS 1->484 ALLP_ECOLI 0.0 89.0 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF66012.1 GT:GENE ncs1 GT:PRODUCT NCS1 nucleoside transporter family GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 629673..631127 GB:FROM 629673 GB:TO 631127 GB:DIRECTION + GB:GENE ncs1 GB:PRODUCT NCS1 nucleoside transporter family GB:NOTE identified by match to protein family HMM PF02133; match to protein family HMM TIGR00800 GB:PROTEIN_ID ACF66012.1 GB:DB_XREF GI:194405793 GB:GENE:GENE ncs1 LENGTH 484 SQ:AASEQ MEHQRELYQQRGYSEDLLPKTETQRNWKAFNYFTLWMGSVHNVPNYVMVGGFFILGLSTFNIMLAIIISALFIAAAMVMNGAAGSKYGVPFAMILRGSYGVRGALFPGLLRGGIAAIMWFGLQCYAGSLAFLILIGKIWPGFLTLGGDFKLLGLSLPGLITFLIFWIINVGIGFGGGKVLNKFTAILNPCIYIVFGGMAIWAISLVGIGPILDYLPSGVQKAEHSGFLFLVVINAVVAVWAAPAVSASDFTQNAYSFRAQALGQTLGLIVAYILFAVASVCIIAGASIHYGMDTWNVLDIVQRWDSLFASFFAVLVILMTTISTNATGNIIPAGYQIAALAPTKLNYKNGVMIASIISLLICPWKLMENQDSIYLFLDIIGGMLGPVIGVMLAHYFVVMRGKINLDELYTASGDYKYYDNGFNLTAFSVTLVAVILSLGGKFIPFMEPLSRVSWFVGVIVAFVAYALLKKRTGFENTGEQKLVG GT:EXON 1|1-484:0| BL:SWS:NREP 1 BL:SWS:REP 1->484|ALLP_ECOLI|0.0|89.0|484/484| TM:NTM 12 TM:REGION 53->75| TM:REGION 87->109| TM:REGION 124->146| TM:REGION 154->176| TM:REGION 191->213| TM:REGION 226->248| TM:REGION 266->288| TM:REGION 304->326| TM:REGION 337->359| TM:REGION 379->400| TM:REGION 423->445| TM:REGION 447->468| SEG 62->77|imlaiiisalfiaaam| SEG 231->247|vvinavvavwaapavsa| BL:PDB:NREP 1 BL:PDB:REP 82->418|2jloA|1e-23|28.0|311/461| RP:PFM:NREP 1 RP:PFM:REP 22->440|PF02133|6e-48|34.0|406/425|Transp_cyt_pur| HM:PFM:NREP 1 HM:PFM:REP 19->457|PF02133|3.5e-137|36.1|429/439|Transp_cyt_pur| GO:PFM:NREP 4 GO:PFM GO:0015205|"GO:nucleobase transmembrane transporter activity"|PF02133|IPR001248| GO:PFM GO:0015931|"GO:nucleobase, nucleoside, nucleotide and nucleic acid transport"|PF02133|IPR001248| GO:PFM GO:0016020|"GO:membrane"|PF02133|IPR001248| GO:PFM GO:0055085|"GO:transmembrane transport"|PF02133|IPR001248| OP:NHOMO 593 OP:NHOMOORG 300 OP:PATTERN --------11111121---------------------------------------------------- --1-----------2------1--12-----11111-122-1--1-------112---------1-1121------------2----------------------1---------------------------------------------------------------------------------------1-----------------2--1----1-----------2----------------1----1------------------11------------------------------------------------------------------11-------1------22-1----------------111--------------------111--1111---------121------11--1111-------31-11-1-11111111-22----------------------------------1----------2333321111122331111113221-1---211--2--2-1-12---------------------------------------------------1-----------1--------------------1--1--------------------------------------11--11111111111-11111111-111111111-112-1---1-1-1-11111-1--11----------11111111111----------------21---------------11111-1-2---2222222312322-111------------------------------------------------------------------------------------------------- ---------------85725224675522111155532222223224422368554411111221334425433476346521-1322-2D45-5154466-2-------------------------------------------------------------------------1-1G1111-2112611------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 311 STR:RPRED 64.3 SQ:SECSTR #################################################################################HHHHTTcccHHHHTTTTccTTTTHHHHHHHH#HHHHHHHHHHHHHHHHH#HHHHHHTTTccccHH#############HHHHHHHHHHHHHHHTHHHHHHHHHHTTHHHHHHHHHHTTccHHHHHHcccccccccHHHHHHHHHHHHHHHTTTHHHHTTccccccccHHHHHHHHHH#HHHHHHHHHHHHHHHHH######HHHHHHHHHHccccHHHHHTcccHHHHHHHHHHHHHHHH#TTHHHHHTHHHHHHHHTccTTTccHHHHHHHHHHHHHTTcGGGTT###TTccccTTTcccccHHHHHHHHHHHHTTTTTcccHHHHTccccTTccT################################################################## DISOP:02AL 1-11,217-220| PSIPRED ccccHHHccccccccccccccHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHccccHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHccccccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEcHHHHcccccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccc //