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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : nudD
DDBJ      :nudD         GDP-mannose mannosyl hydrolase
Swiss-Prot:NUDD_SALTY   RecName: Full=GDP-mannose mannosyl hydrolase;         Short=GDPMH;         EC=3.6.1.-;AltName: Full=Colanic acid biosynthesis protein wcaH;

Homologs  Archaea  2/68 : Bacteria  70/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.113.1
:157 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->148 2i8tB PDBj 3e-70 79.7 %
:RPS:PDB   23->148 2b0vA PDBj 2e-15 16.9 %
:RPS:SCOP  1->147 1ryaA  d.113.1.5 * 9e-24 79.6 %
:HMM:SCOP  1->147 1ryaA_ d.113.1.5 * 5.6e-29 25.9 %
:RPS:PFM   15->135 PF00293 * NUDIX 5e-07 33.6 %
:HMM:PFM   22->144 PF00293 * NUDIX 2.2e-21 28.0 118/135  
:BLT:SWISS 1->157 NUDD_SALTY 9e-90 98.7 %
:PROS 50->71|PS00893|NUDIX_BOX

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68942.1 GT:GENE nudD GT:PRODUCT GDP-mannose mannosyl hydrolase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2238748..2239221) GB:FROM 2238748 GB:TO 2239221 GB:DIRECTION - GB:GENE nudD GB:PRODUCT GDP-mannose mannosyl hydrolase GB:NOTE identified by match to protein family HMM PF00293 GB:PROTEIN_ID ACF68942.1 GB:DB_XREF GI:194408723 GB:GENE:GENE nudD LENGTH 157 SQ:AASEQ MFLRQEDFAAVVRATPLISLDFIVENGQGEILLGQRLNRPAQGYWFVPGGRVCKDETLEAAFARLTQAELGVRLPLAAGTFYGVWQHFYDDNFSGEDFSTHYIVLGFRLRVAESDLRLPDAQHGSYRWLTPEQLLASDNVHENSRAYFFPDTPAVGL GT:EXON 1|1-157:0| SW:ID NUDD_SALTY SW:DE RecName: Full=GDP-mannose mannosyl hydrolase; Short=GDPMH; EC=3.6.1.-;AltName: Full=Colanic acid biosynthesis protein wcaH; SW:GN Name=nudD; Synonyms=gmm, wcaH; OrderedLocusNames=STM2107; SW:KW Complete proteome; Hydrolase; Magnesium; Metal-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->157|NUDD_SALTY|9e-90|98.7|157/157| GO:SWS:NREP 2 GO:SWS GO:0016787|"GO:hydrolase activity"|Hydrolase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| PROS 50->71|PS00893|NUDIX_BOX|PDOC00695| BL:PDB:NREP 1 BL:PDB:REP 1->148|2i8tB|3e-70|79.7|148/149| RP:PDB:NREP 1 RP:PDB:REP 23->148|2b0vA|2e-15|16.9|118/146| RP:PFM:NREP 1 RP:PFM:REP 15->135|PF00293|5e-07|33.6|113/132|NUDIX| HM:PFM:NREP 1 HM:PFM:REP 22->144|PF00293|2.2e-21|28.0|118/135|NUDIX| GO:PFM:NREP 1 GO:PFM GO:0016787|"GO:hydrolase activity"|PF00293|IPR000086| RP:SCP:NREP 1 RP:SCP:REP 1->147|1ryaA|9e-24|79.6|147/160|d.113.1.5| HM:SCP:REP 1->147|1ryaA_|5.6e-29|25.9|147/160|d.113.1.5|1/1|Nudix| OP:NHOMO 80 OP:NHOMOORG 72 OP:PATTERN ------------------------1--1---------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------1-----------------------------1--1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-------12---------------1------------------------------------------------1-------------------------------1----1-1-------1--------------------------------11---1-122111111--2112121111211111112--1-1---1111111111111111-11-1111------------------------------------------------------------------1--------------------------------1------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 155 STR:RPRED 98.7 SQ:SECSTR cccHHHHHHHHTTTccEEEEEEEEcEETTEEEEEEEcccccccEEEccEEEccTTccHHHHHHHHHHHHHcccEEEEEEEEEEEEEEEETTTTEcccccEEEEEEEEEEEEEEEcTTcccTTEEEEEEEEHHHHHHTGGcccTHHHHHcHHHHHH## DISOP:02AL 5-5| PSIPRED ccccHHHHHHHHHccccEEEEEEEEcccccEEEEEEcccccccEEEccccEEcccccHHHHHHHHHHHHHccEEEEEEEEEEEEEEEEcccccccccccEEEEEEEEEEEEccccccccHHHHcEEEEccHHHHHHcccccHHHHHHHccccccccc //