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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : nuoC
DDBJ      :nuoC         NADH-quinone oxidoreductase, C/D subunit
Swiss-Prot:NUOCD_SALSV  RecName: Full=NADH-quinone oxidoreductase subunit C/D;         EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit C/D;AltName: Full=NDH-1 subunit C/D;

Homologs  Archaea  67/68 : Bacteria  603/915 : Eukaryota  155/199 : Viruses  0/175   --->[See Alignment]
d.307.1e.18.1
:600 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   46->178 3i9v5 PDBj 1e-18 42.2 %
:BLT:PDB   216->600 3iam4 PDBj 2e-82 40.8 %
:RPS:PDB   13->223 2ci5A PDBj 8e-28 12.3 %
:RPS:PDB   207->573 3curH PDBj 9e-82 12.9 %
:RPS:SCOP  26->227 2fug51  d.307.1.1 * 3e-48 28.7 %
:RPS:SCOP  225->600 2fug41  e.18.1.2 * e-109 42.2 %
:HMM:SCOP  23->230 2fug51 d.307.1.1 * 5e-58 40.3 %
:HMM:SCOP  225->600 2fug41 e.18.1.2 * 2.5e-118 39.7 %
:RPS:PFM   92->171 PF00329 * Complex1_30kDa 6e-24 55.0 %
:RPS:PFM   329->600 PF00346 * Complex1_49kDa 1e-74 51.6 %
:HMM:PFM   329->600 PF00346 * Complex1_49kDa 3e-122 50.2 271/272  
:HMM:PFM   62->171 PF00329 * Complex1_30kDa 1.1e-35 49.0 100/103  
:BLT:SWISS 1->600 NUOCD_SALSV 0.0 100.0 %
:PROS 252->263|PS00535|COMPLEX1_49K

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67332.1 GT:GENE nuoC GT:PRODUCT NADH-quinone oxidoreductase, C/D subunit GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(2481245..2483047) GB:FROM 2481245 GB:TO 2483047 GB:DIRECTION - GB:GENE nuoC GB:PRODUCT NADH-quinone oxidoreductase, C/D subunit GB:NOTE identified by match to protein family HMM PF00329; match to protein family HMM PF00346; match to protein family HMM TIGR01961; match to protein family HMM TIGR01962 GB:PROTEIN_ID ACF67332.1 GB:DB_XREF GI:194407113 GB:GENE:GENE nuoC LENGTH 600 SQ:AASEQ MVNNMTDLTAQDAAWSTRDHLDDPVIGELRNRFGPDAFTVQATRTGIPVVWVKREQLLEVGDFLKKLPKPYVMLFDLHGMDERLRTHRDGLPAADFSVFYHLISIERNRDIMLKVALSENDLRVPTFTKLFPNANWYERETWEMFGIDIEGHPHLTRIMMPQTWEGHPLRKDYPARATEFDPFELTKAKQDLEMEALTFKPEDWGMKRGTDNEDFMFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPDRVNVIRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRIGGVAHDLPRGWDRLLREFLEWMPKRLDSYEKAALRNTILKGRSQGVAAYGAKEALEWGTTGAGLRATGIDFDVRKWRPYSGYENFDFEVPVGGGVSDCYTRVMLKVEELRQSLRILQQCLDNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPVMPAQESFQMVEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPSAIRGSLVSDLIVYLGSIDFVMSDVDR GT:EXON 1|1-600:0| SW:ID NUOCD_SALSV SW:DE RecName: Full=NADH-quinone oxidoreductase subunit C/D; EC=1.6.99.5;AltName: Full=NADH dehydrogenase I subunit C/D;AltName: Full=NDH-1 subunit C/D; SW:GN Name=nuoC; Synonyms=nuoCD, nuoD; OrderedLocusNames=SeSA_A2554; SW:KW Cell inner membrane; Cell membrane; Complete proteome; Membrane;Multifunctional enzyme; NAD; Oxidoreductase; Quinone; Transport;Ubiquinone. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->600|NUOCD_SALSV|0.0|100.0|600/600| GO:SWS:NREP 8 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0003824|"GO:catalytic activity"|Multifunctional enzyme| GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0048038|"GO:quinone binding"|Quinone| GO:SWS GO:0006810|"GO:transport"|Transport| PROS 252->263|PS00535|COMPLEX1_49K|PDOC00521| BL:PDB:NREP 2 BL:PDB:REP 46->178|3i9v5|1e-18|42.2|128/196| BL:PDB:REP 216->600|3iam4|2e-82|40.8|377/378| RP:PDB:NREP 2 RP:PDB:REP 13->223|2ci5A|8e-28|12.3|195/272| RP:PDB:REP 207->573|3curH|9e-82|12.9|357/545| RP:PFM:NREP 2 RP:PFM:REP 92->171|PF00329|6e-24|55.0|80/103|Complex1_30kDa| RP:PFM:REP 329->600|PF00346|1e-74|51.6|254/254|Complex1_49kDa| HM:PFM:NREP 2 HM:PFM:REP 329->600|PF00346|3e-122|50.2|271/272|Complex1_49kDa| HM:PFM:REP 62->171|PF00329|1.1e-35|49.0|100/103|Complex1_30kDa| GO:PFM:NREP 6 GO:PFM GO:0008137|"GO:NADH dehydrogenase (ubiquinone) activity"|PF00329|IPR001268| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00329|IPR001268| GO:PFM GO:0016651|"GO:oxidoreductase activity, acting on NADH or NADPH"|PF00346|IPR001135| GO:PFM GO:0048038|"GO:quinone binding"|PF00346|IPR001135| GO:PFM GO:0051287|"GO:NAD or NADH binding"|PF00346|IPR001135| GO:PFM GO:0055114|"GO:oxidation reduction"|PF00346|IPR001135| RP:SCP:NREP 2 RP:SCP:REP 26->227|2fug51|3e-48|28.7|181/191|d.307.1.1| RP:SCP:REP 225->600|2fug41|e-109|42.2|370/370|e.18.1.2| HM:SCP:REP 23->230|2fug51|5e-58|40.3|191/0|d.307.1.1|1/1|Nqo5-like| HM:SCP:REP 225->600|2fug41|2.5e-118|39.7|375/0|e.18.1.2|1/1|HydB/Nqo4-like| OP:NHOMO 1803 OP:NHOMOORG 825 OP:PATTERN 11313122111111123112222121121311212222222222122412334132253532221-11 44425---------23222-22--22222222222222223222-2--2-----------44334224442--------21122322311111---2--2-22--34422--------------2222222222423445533352222222222222222222224222222222222222212222--1-2-222222222222222------222222----------2-------------------------------------------------------------------------------------------1---2----------2-------1-1--4--213332----33--211--45-222222222423223223543322222222222-22222222222222224443424433222222333322222222222433-23242232222222222222222222221222222222-222222222222222222222222222222222222222222222232222222222222222222232221-1-3---452223-54435451A555525-2123222222222222222222343422221---------------------1----11--322211111122222213332322233-3333322333323333333222211122222222222222222233332231-21111111111111122222222222--1-----1----------11111111111-1111111111111-1112222222222--------------23222222222222223-222222------------------------------------121111-11-362 -1----2-----32222222222222222222222222222222222222222222222222222----2--222------22222---24222252222222223-22-45422312222121332423E2-333222222222222212212222222432325433123432122--------3242-5------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 587 STR:RPRED 97.8 SQ:SECSTR ############HHHcccccccccccHHHHHHHHHHHHHHHHTTcccEEEEEcccTTcTTTTcGGGGEEEETTEEEEcccccGGGTcccccccc#TTHHHHHHHHHHHTTcEEEEcccTTccccccccccGGGEEEccccEEEEEcccHHHHHHHHHHcTTccEEEEEccccccEEEEETTEEEEcccHHHHHHHHHHHHHccccccccccccccEEEEEcccccHccccEEEEEEEETTEEEEEEETEEcccccHHHHHTTccGGGHHHHHHTTccTTTTHHHHHHHHHHHHHTTccccHHHHHHHHHHHHHHHHHHHHHHHHHTTGGTccTGGGGHHHHHHHHHHHHHHTcccGGGTTcTTTTccTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEETTTEEccGGGGcHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTGGGGGcccccccEEEccEEEcccccHHHHHHHEEEccEEEcTTcTTccccccGGGEEHHEEcTTccccTTcTTccGGGcccccccccccccTTcTTccccccEEEETTccccccHHHHHHHHHHHcHHHHHHHHTTcccccTTccHH DISOP:02AL 1-3,6-6,15-19| PSIPRED ccHHHHHHHHccccccccccccHHHHHHHHHHccccEEEEEEccccEEEEEEcHHHHHHHHHHHHHcccccEEEEEEEEEEccccccccccccccEEEEEEEEEcccccEEEEEEEEccccccccccHHHcccccHHHHHHHHHccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEEEcccEEEEEEEEEEEcHHHHHHHHccccHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHccEEEEcHHHHHHccccEEEEEccccccccccccccccHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEccccEEccccHHHHHHHHHHHHHHccccccccccccccEEEEEEccccEEEEEEEEcccccEEEEEEcccccccHHHHHHHHccccccHHHHHHHHcccccccccc //