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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : nupC
DDBJ      :nupC         nucleoside transporter NupC
Swiss-Prot:NUPC_ECOLI   RecName: Full=Nucleoside permease nupC;AltName: Full=Nucleoside-transport system protein nupC;

Homologs  Archaea  0/68 : Bacteria  340/915 : Eukaryota  117/199 : Viruses  0/175   --->[See Alignment]
:400 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   22->82 PF01773 * Nucleos_tra2_N 9e-10 52.5 %
:RPS:PFM   92->214 PF01956 * DUF106 7e-05 26.3 %
:RPS:PFM   193->400 PF07662 * Nucleos_tra2_C 7e-29 39.6 %
:HMM:PFM   193->399 PF07662 * Nucleos_tra2_C 9.2e-73 42.2 206/208  
:HMM:PFM   9->82 PF01773 * Nucleos_tra2_N 2.1e-27 41.9 74/75  
:HMM:PFM   92->189 PF07670 * Gate 9e-06 13.4 97/109  
:BLT:SWISS 1->400 NUPC_ECOLI 0.0 96.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67783.1 GT:GENE nupC GT:PRODUCT nucleoside transporter NupC GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 2583106..2584308 GB:FROM 2583106 GB:TO 2584308 GB:DIRECTION + GB:GENE nupC GB:PRODUCT nucleoside transporter NupC GB:NOTE identified by match to protein family HMM PF01773; match to protein family HMM PF07662; match to protein family HMM PF07670; match to protein family HMM TIGR00804 GB:PROTEIN_ID ACF67783.1 GB:DB_XREF GI:194407564 GB:GENE:GENE nupC LENGTH 400 SQ:AASEQ MDRVLHFVLALAVVAVLALLVSSDRKKIRIRYVIQLLVIEVLLAWFFLNSDVGLGFVKGFSEMFEKLLGFANEGTNFVFGSMNDQGLAFFFLKVLCPIVFISALIGILQHIRVLPVVIRAIGFLLSKVNGMGKLESFNAVSSLILGQSENFIAYKDILGKMSRNRMYTMAATAMSTVSMSIVGAYMTMLDPKYVVAALVLNMFSTFIVLSLINPYVVDASEENIQMSNLHEGQSFFEMLGEYILAGFKVAIIVAAMLIGFIALIAALNALFATVTGWFGYSISFQGILGYIFYPVAWVMGVPSSEALQVGSIMATKLVSNEFVAMMDLQKIASTLSPRAEGIISVFLVSFANFSSIGIIAGAIKGLNEEQGNVVSRFGLKLVYGSTLVSVLSASIAALVL GT:EXON 1|1-400:0| SW:ID NUPC_ECOLI SW:DE RecName: Full=Nucleoside permease nupC;AltName: Full=Nucleoside-transport system protein nupC; SW:GN Name=nupC; Synonyms=cru; OrderedLocusNames=b2393, JW2389; SW:KW Cell inner membrane; Cell membrane; Complete proteome; Membrane;Transmembrane; Transport. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->400|NUPC_ECOLI|0.0|96.2|400/400| GO:SWS:NREP 5 GO:SWS GO:0005886|"GO:plasma membrane"|Cell inner membrane| GO:SWS GO:0005886|"GO:plasma membrane"|Cell membrane| GO:SWS GO:0016020|"GO:membrane"|Membrane| GO:SWS GO:0016021|"GO:integral to membrane"|Transmembrane| GO:SWS GO:0006810|"GO:transport"|Transport| TM:NTM 9 TM:REGION 2->23| TM:REGION 39->61| TM:REGION 97->119| TM:REGION 166->188| TM:REGION 195->217| TM:REGION 247->269| TM:REGION 281->303| TM:REGION 340->362| TM:REGION 375->397| SEG 8->21|vlalavvavlallv| SEG 254->272|aamligfialiaalnalfa| SEG 354->363|ssigiiagai| RP:PFM:NREP 3 RP:PFM:REP 22->82|PF01773|9e-10|52.5|61/75|Nucleos_tra2_N| RP:PFM:REP 92->214|PF01956|7e-05|26.3|114/168|DUF106| RP:PFM:REP 193->400|PF07662|7e-29|39.6|207/211|Nucleos_tra2_C| HM:PFM:NREP 3 HM:PFM:REP 193->399|PF07662|9.2e-73|42.2|206/208|Nucleos_tra2_C| HM:PFM:REP 9->82|PF01773|2.1e-27|41.9|74/75|Nucleos_tra2_N| HM:PFM:REP 92->189|PF07670|9e-06|13.4|97/109|Gate| GO:PFM:NREP 3 GO:PFM GO:0005415|"GO:nucleoside:sodium symporter activity"|PF01773|IPR002668| GO:PFM GO:0006810|"GO:transport"|PF01773|IPR002668| GO:PFM GO:0016020|"GO:membrane"|PF01773|IPR002668| OP:NHOMO 895 OP:NHOMOORG 457 OP:PATTERN -------------------------------------------------------------------- 111--1------1------------------------------------------1----------1--------------------------1------1--111-11--------------------------------------1-1-----------------1111---------------------13777776775777767113313778---1111------2-23333333333333322222--1----1---1111--311111---111------------------1111111111111---------------1111111111----2222-1-1-------------------------1111------1-111---11111------------11111111------------------111-------------------111-1--------------------------------11111------1111--1-11--1-1111-11-1----------------------1----2---------------111-----11-------1---1--------------------1-1111111-------53-1--111111222211611121462225-------------23112223332323232-323333234332333333332333222121-1111111111-1423233331-32222221222211--------------2-111111111111111------1---1------------------222222222-455433333233331111111111-------------------------------------------------------------1- ------------11111--111111111-----1111111-11111--11111-111111111-1----1----1------1111----1211111------1323--1-7312224-2111328312-4G3-334-31121224122127--3221222464532-32--2313--------------1----1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-1,218-233| PSIPRED cHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHcccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc //