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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : proS
DDBJ      :proS         prolyl-tRNA synthetase
Swiss-Prot:SYP_SALTY    RecName: Full=Prolyl-tRNA synthetase;         EC=6.1.1.15;AltName: Full=Proline--tRNA ligase;         Short=ProRS;

Homologs  Archaea  59/68 : Bacteria  877/915 : Eukaryota  166/199 : Viruses  0/175   --->[See Alignment]
c.51.1d.104.1d.116.1
:572 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   1->553 2j3lB PDBj e-144 48.2 %
:RPS:PDB   6->334 3cd5A PDBj 9e-61 15.0 %
:RPS:PDB   382->519 2eiuE PDBj 6e-32 11.6 %
:RPS:SCOP  17->210 1evkA2  d.104.1.1 * 1e-60 24.2 %
:RPS:SCOP  253->388 1wdvA  d.116.1.1 * 4e-21 21.1 %
:RPS:SCOP  432->481 1serA2  d.104.1.1 * 4e-08 20.8 %
:RPS:SCOP  463->556 1h4qA1  c.51.1.1 * 5e-26 38.3 %
:HMM:SCOP  9->478 1atiA2 d.104.1.1 * 4.8e-108 44.7 %
:HMM:SCOP  462->572 2g4cA1 c.51.1.1 * 1.6e-32 39.1 %
:RPS:PFM   51->218 PF00587 * tRNA-synt_2b 7e-22 32.9 %
:RPS:PFM   257->369 PF04073 * YbaK 2e-12 36.7 %
:RPS:PFM   491->566 PF03129 * HGTP_anticodon 5e-11 34.2 %
:HMM:PFM   51->215 PF00587 * tRNA-synt_2b 1.5e-44 26.8 164/173  
:HMM:PFM   257->376 PF04073 * YbaK 1.8e-29 32.8 116/123  
:HMM:PFM   475->568 PF03129 * HGTP_anticodon 6.2e-24 32.3 93/94  
:BLT:SWISS 1->572 SYP_SALTY 0.0 100.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68125.1 GT:GENE proS GT:PRODUCT prolyl-tRNA synthetase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(290196..291914) GB:FROM 290196 GB:TO 291914 GB:DIRECTION - GB:GENE proS GB:PRODUCT prolyl-tRNA synthetase GB:NOTE identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF04073; match to protein family HMM TIGR00409 GB:PROTEIN_ID ACF68125.1 GB:DB_XREF GI:194407906 GB:GENE:GENE proS LENGTH 572 SQ:AASEQ MRTSQYLLSTLKETPADAEVISHQLMLRAGMIRKLASGLYTWLPTGLRVLKKVENIVREEMNNAGAIEVSMPVVQPADLWQESGRWEQYGPELLRFVDRGERPFVLGPTHEEVITDLVRNELSSYKQLPLNFFQIQTKFRDEVRPRFGVMRSREFLMKDAYSFHTSQESLQETYDAMYAAYSRIFSRMGLDFRAVQADTGSIGGNASHEFQVLAQSGEDDIVFSDVSDYAANIELAEAIAPQTPRAAATQEMTLVDTPNAKTIAELVEQFNLPIEKTVKTLLVKAVKDSKSPLVALLVRGDHELNEVKAEKLPHVASPLTFATEEEIRAVINAGPGSLGPVNMPIPVIIDRTVAAMSDFAAGANIDGKHYFGINWDRDVATPVVADIRNVVAGDPSPDGQGTLLIKRGIEVGHIFQLGTKYSEALKASVQGEDGRNQILTMGCYGIGVTRVVAAAIEQNFDERGIVWPDAIAPFQVAILPMNMHKSFRVQELAEKLYSELRAQGIEVLMDDRKERPGVMFADMELIGIPHTIVIGDRNLDNDDIEYKYRRSGEKSLIKTGDIVDYLVKAIKG GT:EXON 1|1-572:0| SW:ID SYP_SALTY SW:DE RecName: Full=Prolyl-tRNA synthetase; EC=6.1.1.15;AltName: Full=Proline--tRNA ligase; Short=ProRS; SW:GN Name=proS; OrderedLocusNames=STM0242; SW:KW Aminoacyl-tRNA synthetase; ATP-binding; Complete proteome; Cytoplasm;Ligase; Nucleotide-binding; Protein biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->572|SYP_SALTY|0.0|100.0|572/572| GO:SWS:NREP 6 GO:SWS GO:0004812|"GO:aminoacyl-tRNA ligase activity"|Aminoacyl-tRNA synthetase| GO:SWS GO:0005524|"GO:ATP binding"|ATP-binding| GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0016874|"GO:ligase activity"|Ligase| GO:SWS GO:0000166|"GO:nucleotide binding"|Nucleotide-binding| GO:SWS GO:0006412|"GO:translation"|Protein biosynthesis| SEG 276->287|ktvktllvkavk| BL:PDB:NREP 1 BL:PDB:REP 1->553|2j3lB|e-144|48.2|544/570| RP:PDB:NREP 2 RP:PDB:REP 6->334|3cd5A|9e-61|15.0|287/425| RP:PDB:REP 382->519|2eiuE|6e-32|11.6|121/125| RP:PFM:NREP 3 RP:PFM:REP 51->218|PF00587|7e-22|32.9|167/170|tRNA-synt_2b| RP:PFM:REP 257->369|PF04073|2e-12|36.7|109/122|YbaK| RP:PFM:REP 491->566|PF03129|5e-11|34.2|76/91|HGTP_anticodon| HM:PFM:NREP 3 HM:PFM:REP 51->215|PF00587|1.5e-44|26.8|164/173|tRNA-synt_2b| HM:PFM:REP 257->376|PF04073|1.8e-29|32.8|116/123|YbaK| HM:PFM:REP 475->568|PF03129|6.2e-24|32.3|93/94|HGTP_anticodon| GO:PFM:NREP 9 GO:PFM GO:0000166|"GO:nucleotide binding"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF00587|IPR002314| GO:PFM GO:0005524|"GO:ATP binding"|PF00587|IPR002314| GO:PFM GO:0005737|"GO:cytoplasm"|PF00587|IPR002314| GO:PFM GO:0006412|"GO:translation"|PF00587|IPR002314| GO:PFM GO:0006418|"GO:tRNA aminoacylation for protein translation"|PF00587|IPR002314| GO:PFM GO:0004812|"GO:aminoacyl-tRNA ligase activity"|PF03129|IPR004154| GO:PFM GO:0005524|"GO:ATP binding"|PF03129|IPR004154| GO:PFM GO:0006412|"GO:translation"|PF03129|IPR004154| RP:SCP:NREP 4 RP:SCP:REP 17->210|1evkA2|1e-60|24.2|190/291|d.104.1.1| RP:SCP:REP 253->388|1wdvA|4e-21|21.1|128/150|d.116.1.1| RP:SCP:REP 432->481|1serA2|4e-08|20.8|50/311|d.104.1.1| RP:SCP:REP 463->556|1h4qA1|5e-26|38.3|94/127|c.51.1.1| HM:SCP:REP 9->478|1atiA2|4.8e-108|44.7|300/394|d.104.1.1|1/1|Class II aaRS and biotin synthetases| HM:SCP:REP 462->572|2g4cA1|1.6e-32|39.1|110/0|c.51.1.1|1/1|Class II aaRS ABD-related| OP:NHOMO 1740 OP:NHOMOORG 1102 OP:PATTERN 111111111111111111111111-11111111111-111111111-11111111-1---11--1111 1221311111111111111-111111111111111122211--112111111111111112111112221111111112121-21111111211112112211211121111111111111111111121111112111112222-22211122222111111222222222222222222221111-221212333333334333333323332333212322222212134222222222222222212322121111111111111111122122233332223223333333333333333333333333332223333112122221222222211121111211122-1211211211211121111-2-11111111122121111111112222222222111111111111211222211211111111211122221211111111122212-222222222222112222222222222222221121212222222223222222242222222332222222112221221222222232222222222222222222--111111111111122212121111211-112221211111122222222222111112212222222222222221222212112112-2122111211121221121111111111-1111111111111111111111122221111111111111111211111111122222222222221121111111112232222222212222211211111112222222222322211122222122222222222212222232222222222222222221212222222---1--1-222111---11-11------1--1----2222222222-11 1111333-1-1---111222111111122121111112-1111222111111211111322222222222112121111112223211--2-11--111-122112-3-41132211111112122111121-111-1--11111----11--1-111211611112111-24-3112---1--112333-13142112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 571 STR:RPRED 99.8 SQ:SECSTR TccccEEEEEEcccTTHHHEEEEEEEEEccEEEcHHHHHHHHHHHcHHHHHHHHHHHHTTcTHTcEEcccEEEEETTEEEEEEEcTTcccHHHHHHHHHHHHHHHHHHcTTcEEEEccccHHHHHHTTccEccccccccHHHHHHccETTccEEEEEEEEEcHHHHHHTccccHHHHHHHHHHHHHccHHTTTHHHHHTTcccEEcccHHcTTccHHHHHHHHHTTccGGGHHHHTcEEEEEEEETTTTcEEEEEEEEEEEccccccGGGGcHHccEEEEccGGGGGGHHHHHHHHTccccccccTTHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTccccccccEEEEEccccEEEcccccEEEcccTTcccccccHHHHHcEHccTTccccEEEEEETTEEEEEEEEccccHHHHHHHHHHHHHTTTTcccEEEEEEEHHHHHHHHHTcccGGGGccccccTTcccTTTTccccccHHHHHHTTccccHHHHTTTccEEEccccccHHHHHHHHHHTTccEEEEEcHHHHHHTEEEEEETTTccEEEEETTHHHHHHHHHHE# PSIPRED ccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccEEEEcccHHHHHHHHHHHHHHHHHHcccEEEEcccEEcHHHHHHccccccccccEEEEEEccccEEEEEcccHHHHHHHHHHccccHHHccEEEEEEccEEccccccccccEEEEEEEEccEEEEcccHHHHHHHHHHHHHHHHHHHHHcccccEEEEccccccccHHHcEEEEEccccccEEEEcccccHHHHHHHHHHccccccccccccccEEEccccHHHHHHHHHHccccHHHEEcEEEEEEEEccccEEEEEEEcccccccHHHHHHccccccccEEccHHHHHHHHccccccccccccccEEEEEcHHHccccEEEEccccccEEEcccHHHHccccEEEEEEEEcccccccccEEEEEcccEEEEEEEEEEcccccHHcccEEEcccccEEEEEEEcccccHHHHHHHHHHHHccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHHccccEEEEEcccHHHccEEEEEEcccccEEEEEHHHHHHHHHHHHcc //