[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : prpD
DDBJ      :prpD         2-methylcitrate dehydratase
Swiss-Prot:PRPD_SALTI   RecName: Full=2-methylcitrate dehydratase;         EC=4.2.1.79;

Homologs  Archaea  20/68 : Bacteria  212/915 : Eukaryota  77/199 : Viruses  0/175   --->[See Alignment]
e.44.1
:483 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->483 1szqA PDBj 0.0 94.4 %
:RPS:SCOP  11->483 1szqA  e.44.1.1 * e-130 92.0 %
:HMM:SCOP  11->483 1szqA_ e.44.1.1 * 2.3e-158 38.1 %
:RPS:PFM   19->431 PF03972 * MmgE_PrpD 2e-92 51.4 %
:HMM:PFM   14->475 PF03972 * MmgE_PrpD 1.3e-177 48.6 440/445  
:BLT:SWISS 1->483 PRPD_SALTI 0.0 98.6 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF67768.1 GT:GENE prpD GT:PRODUCT 2-methylcitrate dehydratase GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 467322..468773 GB:FROM 467322 GB:TO 468773 GB:DIRECTION + GB:GENE prpD GB:PRODUCT 2-methylcitrate dehydratase GB:NOTE identified by match to protein family HMM PF03972; match to protein family HMM TIGR02330 GB:PROTEIN_ID ACF67768.1 GB:DB_XREF GI:194407549 GB:GENE:GENE prpD LENGTH 483 SQ:AASEQ MSAHISNIRPDFDREIVDIVDYVMNYEITSKVAYDTAHYCLLDTLGCGLEALEYPACKKLLGPIVPGTVVPNGARVPGTQFQLDPVQAAFNIGAMIRWLDFNDTWLAAEWGHPSDNLGGILAIADWLSRNAVAAGKAPLTMKQVLSGMIKAHEIQGCIALENAFNRVGLDHVLLVKVASTAVVAEMLGLTRDEILNAVSLAWVDGQSLRTYRHAPNTGTRKSWAAGDATSRAVRLALMAKTGEMGYPSALTAKTWGFYDVSFKGETFRFQRPYGSYVMENVLFKISFPAEFHSQTAVEAAMTLYEQMQAAGKTAADIEKVTIRTHEACLRIIDKKGPLNNPADRDHCIQYMVAVPLLFGRLTAADYEDEVAQDKRIDALREKIVCYEDPAFTADYHDPEKRAIGNAISVEFTDGSRFDEVVVEYPIGHARRRADGIPKLIEKFKINLARQFPTRQQQRILDVSLDRARLEQMPVNEYLDLYVI GT:EXON 1|1-483:0| SW:ID PRPD_SALTI SW:DE RecName: Full=2-methylcitrate dehydratase; EC=4.2.1.79; SW:GN Name=prpD; OrderedLocusNames=STY0402, t2494; SW:KW 2Fe-2S; Complete proteome; Iron; Iron-sulfur; Lyase; Metal-binding. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->483|PRPD_SALTI|0.0|98.6|483/483| GO:SWS:NREP 4 GO:SWS GO:0051537|"GO:2 iron, 2 sulfur cluster binding"|2Fe-2S| GO:SWS GO:0051536|"GO:iron-sulfur cluster binding"|Iron-sulfur| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0046872|"GO:metal ion binding"|Metal-binding| BL:PDB:NREP 1 BL:PDB:REP 11->483|1szqA|0.0|94.4|461/461| RP:PFM:NREP 1 RP:PFM:REP 19->431|PF03972|2e-92|51.4|391/436|MmgE_PrpD| HM:PFM:NREP 1 HM:PFM:REP 14->475|PF03972|1.3e-177|48.6|440/445|MmgE_PrpD| GO:PFM:NREP 2 GO:PFM GO:0019543|"GO:propionate catabolic process"|PF03972|IPR005656| GO:PFM GO:0047547|"GO:2-methylcitrate dehydratase activity"|PF03972|IPR005656| RP:SCP:NREP 1 RP:SCP:REP 11->483|1szqA|e-130|92.0|473/473|e.44.1.1| HM:SCP:REP 11->483|1szqA_|2.3e-158|38.1|473/473|e.44.1.1|1/1|2-methylcitrate dehydratase PrpD| OP:NHOMO 357 OP:NHOMOORG 309 OP:PATTERN 11----1111111111-11111---------------------------------------111---- -----1--2321-111111-1---11111111-----1-11111111--11-211111------------------------2--------------------------------------------------------------1---------------------------------------------1-1111111111111111111111111---11---------1---------------------------------------------------------------------------------------------------------------------------------------------------------------1-1----------------------11----------------------1-------111111111-----11-----------------------------1------11111111111222211132222-2211--1--1--1----------1111--1------------1---1------------------1-1----------------------1--------------11--1--1-11----------------------1111------1------1111111111-11-1111111111-1-111-----21-1111111111111111-------------------------1111111111-1111----------------------11---11111111-1111-----------------1----------11--------------------------------------------------------------------1-- ----11---------111112223333111121111111111111123112111111111111--11-1-11---111111--------1411111----141---------------------------------------------------------------------------18111------1--------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 458 STR:RPRED 94.8 SQ:SECSTR ##########cccHHHHHHHHHH#HcccccHHHHHHHHHHHHHHHHHHHHHTTcHHHHTTcccccTTcccTTcEEcTTcccEEcHHHHHHHHHH#HHHTcccccccccccccGGGGHHHHHHHHHHHHHHHHHTTccccc#HHHHHH#HHHHHHHHHHTTTcccGGGTccTHHHHHHHHHHHHHH#TTccHHHHHHHHHHHHTccccccGGGcTTcccTHHHHHHHHHHHHHHHHHH#HHTTc#ccTTTTTcTTTcHHHHHcTTcccccccccccHH#HHccccccccccTTTHHHHHHH#HHHHH#HHTTccGGGEEEEEEEEcHHHHHHHccccccccHHHHTTcHHH#HHHHHHHccccGGGGcHHHHTcHHHHHHHHTEEEEEcHHHHHHHHcTTTccccEEEEEEETTccccccEEEcccTTcGGGHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcHHHHHH#cHHHHHTT### DISOP:02AL 1-11| PSIPRED ccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHccccccccEEEcccccccHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHccccccccccccEEcHHHHHHHHHHHccccHHHHHHHHHHHHcccHHHHHHcccccHHHHHccHHHHHHHHHHHHHHHHHccccccccccccccccEEEEcccccccccccccccEEEEEEEEEEcccccccHHHHHHHHHHHHHHHHHccccHHHEEEEEEEEcHHHHHHcccccccccHHHHHHHHHHHHHHHHHcccccHHHccHHHHccHHHHHHHHHcEEEEcccccccccccccccccEEEEEEEccccEEEEEEEccccccccccccccHHHHHHHHHHHHccccHHHHHHHHHHHHcHHHHHcccHHHHHHHHcc //