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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : rpmI
DDBJ      :rpmI         ribosomal protein L35
Swiss-Prot:RL35_SHISS   RecName: Full=50S ribosomal protein L35;

Homologs  Archaea  0/68 : Bacteria  77/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.301.1
:65 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->65 1vs63 PDBj 1e-19 100.0 %
:RPS:PDB   27->64 3bbo5 PDBj 6e-06 44.7 %
:RPS:SCOP  2->65 1vs631  d.301.1.1 * 1e-08 70.3 %
:HMM:SCOP  2->65 2i2t31 d.301.1.1 * 1.3e-22 57.8 %
:HMM:PFM   2->62 PF01632 * Ribosomal_L35p 1.2e-28 55.7 61/61  
:BLT:SWISS 1->65 RL35_SHISS 3e-20 100.0 %
:PROS 5->31|PS00936|RIBOSOMAL_L35
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70064.1 GT:GENE rpmI GT:PRODUCT ribosomal protein L35 GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1419815..1420012 GB:FROM 1419815 GB:TO 1420012 GB:DIRECTION + GB:GENE rpmI GB:PRODUCT ribosomal protein L35 GB:NOTE identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001 GB:PROTEIN_ID ACF70064.1 GB:DB_XREF GI:194409845 GB:GENE:GENE rpmI LENGTH 65 SQ:AASEQ MPKIKTVRGAAKRFKKTGKGGFKHKHANLRHILTKKATKRKRHLRPKAMVSKGDLGLVIACLPYA GT:EXON 1|1-65:0| SW:ID RL35_SHISS SW:DE RecName: Full=50S ribosomal protein L35; SW:GN Name=rpmI; OrderedLocusNames=SSON_1441; SW:KW Complete proteome; Ribonucleoprotein; Ribosomal protein. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->65|RL35_SHISS|3e-20|100.0|65/65| GO:SWS:NREP 2 GO:SWS GO:0030529|"GO:ribonucleoprotein complex"|Ribonucleoprotein| GO:SWS GO:0005840|"GO:ribosome"|Ribosomal protein| PROS 5->31|PS00936|RIBOSOMAL_L35|PDOC00721| SEG 8->26|rgaakrfkktgkggfkhkh| BL:PDB:NREP 1 BL:PDB:REP 2->65|1vs63|1e-19|100.0|64/64| RP:PDB:NREP 1 RP:PDB:REP 27->64|3bbo5|6e-06|44.7|38/62| HM:PFM:NREP 1 HM:PFM:REP 2->62|PF01632|1.2e-28|55.7|61/61|Ribosomal_L35p| RP:SCP:NREP 1 RP:SCP:REP 2->65|1vs631|1e-08|70.3|64/64|d.301.1.1| HM:SCP:REP 2->65|2i2t31|1.3e-22|57.8|64/0|d.301.1.1|1/1|L35p-like| OP:NHOMO 77 OP:NHOMOORG 77 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------111111111-111--1-111111111111111111111111111111-111111111111111111111-11-111111111--1------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 64 STR:RPRED 98.5 SQ:SECSTR #cccccHHHHHHHccccTTccccccccccTTcccccccccTTcccEEEcccTHHHHTTTTTTTcc DISOP:02AL 1-6,31-47| PSIPRED cccccccHHHHEEEEEcccccEEEcccccccccccccHHHHHHccccEEEcHHHHHHHHHHcccc //