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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : sppA
DDBJ      :sppA         signal peptide peptidase SppA, 67K type
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  584/915 : Eukaryota  26/199 : Viruses  0/175   --->[See Alignment]
c.13.2c.14.1
:618 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->550 3bf0C PDBj 0.0 89.1 %
:RPS:PDB   94->550 3bezD PDBj 3e-61 76.8 %
:RPS:SCOP  83->152 1h4xA  c.13.2.1 * 3e-05 12.9 %
:RPS:SCOP  326->528 1tg6A1  c.14.1.1 * 4e-14 19.5 %
:HMM:SCOP  29->289 1y7oA1 c.14.1.1 * 4.2e-30 30.2 %
:HMM:SCOP  305->530 1y7oA1 c.14.1.1 * 1.2e-42 36.0 %
:RPS:PFM   144->287 PF01343 * Peptidase_S49 2e-22 42.1 %
:RPS:PFM   396->531 PF01343 * Peptidase_S49 1e-22 37.5 %
:HMM:PFM   141->294 PF01343 * Peptidase_S49 7.2e-43 30.0 150/154  
:HMM:PFM   392->543 PF01343 * Peptidase_S49 9e-53 42.8 152/154  
:HMM:PFM   83->148 PF01740 * STAS 0.00037 18.2 66/117  
:BLT:SWISS 1->618 SPPA_ECOLI 0.0 86.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF68279.1 GT:GENE sppA GT:PRODUCT signal peptide peptidase SppA, 67K type GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION complement(1377955..1379811) GB:FROM 1377955 GB:TO 1379811 GB:DIRECTION - GB:GENE sppA GB:PRODUCT signal peptide peptidase SppA, 67K type GB:NOTE identified by match to protein family HMM PF01343; match to protein family HMM TIGR00705; match to protein family HMM TIGR00706 GB:PROTEIN_ID ACF68279.1 GB:DB_XREF GI:194408060 GB:GENE:GENE sppA LENGTH 618 SQ:AASEQ MRTLWRFIAGFFKWTWRVLNFVREMVLNLFFIFLVLVGVGIWMQIGNGSNSEQTARGALLLDISGVIVDKPSTNHRLGALGRQLFGASSDRLQENSMFDIVNAIRQAKDDRNITGIVLDLKNFTGADQPSMRYIGKALREFRDSGKPVFAVGENYSQGQYYLASFANKIWLSPQGQVDLHGFATNGLYYKTLLDKLKVSTHVFRVGTYKSAVEPFIRDDMSPAAREADSRWIGELWQNYLHTVSANRQISPQQLFPGAQAIIDGLTSVGGDTAKYALDHKLVDALASSADVEKALTKQFGWSKTENNYRAISYYDYSLKTPADTGGTIAVIFANGAIMDGEETPGNVGGDTTASQIRDARLDPKVKAIVLRVNSPGGSVNASEVIRAELAAARAAGKPVVVSMGGMAASGGYWISTPANYIVASPSTLTGSIGIFGVINTVENSLSSIGVHSDGVSTSPLADISMTKALSPEVQQMMQLSIEYGYKRFITLVADARKRTPEQIDKIAQGHVWTGEDAKANGLVDSLGDFDDAVAKAAELAKLKQWHLDYYQDEPTVLDMVMDSMTGSVRAMLPETIQAMLPAPLVSAANTVKAEGDKLAAFNDPQNRYAFCLTCANVR GT:EXON 1|1-618:0| BL:SWS:NREP 1 BL:SWS:REP 1->618|SPPA_ECOLI|0.0|86.1|618/618| TM:NTM 1 TM:REGION 23->45| SEG 29->41|lffiflvlvgvgi| SEG 386->395|raelaaaraa| SEG 532->543|avakaaelaklk| BL:PDB:NREP 1 BL:PDB:REP 56->550|3bf0C|0.0|89.1|477/478| RP:PDB:NREP 1 RP:PDB:REP 94->550|3bezD|3e-61|76.8|449/471| RP:PFM:NREP 2 RP:PFM:REP 144->287|PF01343|2e-22|42.1|134/153|Peptidase_S49| RP:PFM:REP 396->531|PF01343|1e-22|37.5|136/153|Peptidase_S49| HM:PFM:NREP 3 HM:PFM:REP 141->294|PF01343|7.2e-43|30.0|150/154|Peptidase_S49| HM:PFM:REP 392->543|PF01343|9e-53|42.8|152/154|Peptidase_S49| HM:PFM:REP 83->148|PF01740|0.00037|18.2|66/117|STAS| GO:PFM:NREP 4 GO:PFM GO:0006508|"GO:proteolysis"|PF01343|IPR002142| GO:PFM GO:0008233|"GO:peptidase activity"|PF01343|IPR002142| GO:PFM GO:0006508|"GO:proteolysis"|PF01343|IPR002142| GO:PFM GO:0008233|"GO:peptidase activity"|PF01343|IPR002142| RP:SCP:NREP 2 RP:SCP:REP 83->152|1h4xA|3e-05|12.9|62/111|c.13.2.1| RP:SCP:REP 326->528|1tg6A1|4e-14|19.5|164/184|c.14.1.1| HM:SCP:REP 29->289|1y7oA1|4.2e-30|30.2|189/0|c.14.1.1|1/2|ClpP/crotonase| HM:SCP:REP 305->530|1y7oA1|1.2e-42|36.0|189/0|c.14.1.1|2/2|ClpP/crotonase| OP:NHOMO 860 OP:NHOMOORG 641 OP:PATTERN ----------------1-------11112-11--11111111111----1111-111-1-1-11-1-- -11-----------11111-1111111111111111-----111--------------------111---1--------1-12111111111-1111--1111-1111111---------1111111111111111---22----1222122222111111112221222211111111111111111--1--1---------------111111---1111---1111111-1------------------1-----------------------------------------------------------------------------------------------11-1--11---111-2----1--222111111----1111111111111112222222222-112113121211111-1111112211111-1-1111--1--------111112211111111111111-111111-1111-----11111-----1112111111111--11111111-1111111111-----1----111111111111111111112111121112112222-111112212222233121111111111111111111111111111111-11212121111111111121211211--1112--1---22222222222222222-222222222222212222222222222222222222222222222222222212222222222221122111112222121--2222122221-22222222222111112222121--1----1-111111111111122222222223211111111111111--21223333--------11------------------------------------11- ----111-------1-------------------------------------------------------------------------------------111------1---------------------------------------------------------------21222-511-221122-11-2----1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 488 STR:RPRED 79.0 SQ:SECSTR ######################################################ccEEEEEcccEEEEccccc###cccccEEE#####ccccEEEHHHHHHHHHHHHTcTTEEEEEEccTTTEEEccHHHHHHHHHHHHHHTTTccEEEEcccccHHHHHHHTTccEEEEcTTcccccccccccccccHHHHHHTTcEEEEEEEcTTcGGGGGGTccccHHHHHHHHHHHHHHHHHHHHHHHHHHHTccHHHHccHHHHHHHHHHHTTTcHHHHHHHTTcccEEccHHHHHHHHHHHHcEETTTTEEcEEETTTccccccccccccEEEEEEEEccEcccccTTcEEHHHHHHHHHHHHHcTTEEEEEEEEEEccccHHHHHHHHHHHHHHHHTTccEEEEEEEEEETHHHHTTTTccEEEEcTTcEEEcccEEEEEEEcHHHHHHTTcccccccccGGGcccccTTccccHHHHHHHHHHHHHHHHHHHHHHHTTccHHHHHTTcTTcEEEHHHHHHHTcccEEccHHHHHHHHHHHcccccEEEEcc#################################################################### DISOP:02AL 1-1,43-57,312-322,562-570,618-619| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccEEEcccccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHcccccEEEEEEcccccccHHHHHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHccEEEEcccccccEEEEEEEcccHHHHHHHcccEEEEEEEEcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHccccHHHHHHcccHHHHccHHHHHHHHHHHHccccccccccccccccccccccccccccEEEEEEEEEEEccccccccccHHHHHHHHHHHHHcccccEEEEEEEcccccHHHHHHHHHHHHHHHHccccEEEEEccHHHHHHHHHHHcccEEEEcccccccccEEEEccccHHHHHHHcccEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHcccEEEHHHHHHcccccccccHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccEEEEEEEccccc //