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Salmonella enterica subsp. enterica serovar Heidelberg str. SL476 (sent8)
Gene : trpB
DDBJ      :trpB         tryptophan synthase, beta subunit
Swiss-Prot:TRPB_SALTY   RecName: Full=Tryptophan synthase beta chain;         EC=4.2.1.20;

Homologs  Archaea  60/68 : Bacteria  753/915 : Eukaryota  123/199 : Viruses  0/175   --->[See Alignment]
c.79.1
:397 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->395 1k3uB PDBj 0.0 100.0 %
:RPS:PDB   2->395 2cleB PDBj 4e-97 93.9 %
:RPS:SCOP  2->391 1a50B  c.79.1.1 * 2e-97 93.8 %
:HMM:SCOP  2->391 1qopB_ c.79.1.1 * 1.8e-155 49.2 %
:RPS:PFM   73->375 PF00291 * PALP 9e-17 32.6 %
:HMM:PFM   53->378 PF00291 * PALP 1.9e-46 32.1 274/297  
:BLT:SWISS 1->397 TRPB_SALTY 0.0 100.0 %
:PROS 80->94|PS00168|TRP_SYNTHASE_BETA
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF70021.1 GT:GENE trpB GT:PRODUCT tryptophan synthase, beta subunit GT:DATABASE GIB00763CH01 GT:ORG sent8 GB:ACCESSION GIB00763CH01 GB:LOCATION 1870890..1872083 GB:FROM 1870890 GB:TO 1872083 GB:DIRECTION + GB:GENE trpB GB:PRODUCT tryptophan synthase, beta subunit GB:NOTE identified by match to protein family HMM PF00291; match to protein family HMM TIGR00263 GB:PROTEIN_ID ACF70021.1 GB:DB_XREF GI:194409802 GB:GENE:GENE trpB LENGTH 397 SQ:AASEQ MTTLLNPYFGEFGGMYVPQILMPALNQLEEAFVSAQKDPEFQAQFADLLKNYAGRPTALTKCQNITAGTRTTLYLKREDLLHGGAHKTNQVLGQALLAKRMGKSEIIAETGAGQHGVASALASALLGLKCRIYMGAKDVERQSPNVFRMRLMGAEVIPVHSGSATLKDACNEALRDWSGSYETAHYMLGTAAGPHPYPTIVREFQRMIGEETKAQILDKEGRLPDAVIACVGGGSNAIGMFADFINDTSVGLIGVEPGGHGIETGEHGAPLKHGRVGIYFGMKAPMMQTADGQIEESYSISAGLDFPSVGPQHAYLNSIGRADYVSITDDEALEAFKTLCRHEGIIPALESSHALAHALKMMREQPEKEQLLVVNLSGRGDKDIFTVHDILKARGEI GT:EXON 1|1-397:0| SW:ID TRPB_SALTY SW:DE RecName: Full=Tryptophan synthase beta chain; EC=4.2.1.20; SW:GN Name=trpB; OrderedLocusNames=STM1726; SW:KW 3D-structure; Amino-acid biosynthesis;Aromatic amino acid biosynthesis; Complete proteome; Lyase;Pyridoxal phosphate; Tryptophan biosynthesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->397|TRPB_SALTY|0.0|100.0|397/397| GO:SWS:NREP 4 GO:SWS GO:0008652|"GO:cellular amino acid biosynthetic process"|Amino-acid biosynthesis| GO:SWS GO:0009073|"GO:aromatic amino acid family biosynthetic process"|Aromatic amino acid biosynthesis| GO:SWS GO:0016829|"GO:lyase activity"|Lyase| GO:SWS GO:0000162|"GO:tryptophan biosynthetic process"|Tryptophan biosynthesis| PROS 80->94|PS00168|TRP_SYNTHASE_BETA|PDOC00152| SEG 118->128|asalasallgl| SEG 348->359|alesshalahal| BL:PDB:NREP 1 BL:PDB:REP 2->395|1k3uB|0.0|100.0|394/394| RP:PDB:NREP 1 RP:PDB:REP 2->395|2cleB|4e-97|93.9|394/394| RP:PFM:NREP 1 RP:PFM:REP 73->375|PF00291|9e-17|32.6|270/293|PALP| HM:PFM:NREP 1 HM:PFM:REP 53->378|PF00291|1.9e-46|32.1|274/297|PALP| GO:PFM:NREP 3 GO:PFM GO:0003824|"GO:catalytic activity"|PF00291|IPR001926| GO:PFM GO:0008152|"GO:metabolic process"|PF00291|IPR001926| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00291|IPR001926| RP:SCP:NREP 1 RP:SCP:REP 2->391|1a50B|2e-97|93.8|390/390|c.79.1.1| HM:SCP:REP 2->391|1qopB_|1.8e-155|49.2|390/390|c.79.1.1|1/1|Tryptophan synthase beta subunit-like PLP-dependent enzymes| OP:NHOMO 1171 OP:NHOMOORG 936 OP:PATTERN 221-1---1111111-11212122111212122121111111122122222221221121-11-1-11 1121112211111111111-11111111111111111111121111111111121111--212111111111111111--11221211221112---111-111111111-11-111-21-----22222222222222222221211211111111111111111112211111111111111111122111111111111-111111111111111221111111111112-1111111111111111111----11-----11--11----1-111-------21111111111111-------------2--111----21-11-------1-12-111---2-2--11122222222112111121111211111-----111111112122111111111111-11111111111-1111111111111111111122221111111111111111112-----------------------------111111111111111111111111111111-1111111111111111222112111112111121111111111211-2122222222222121222242222221122211111111111111111112221211111121211111111111111111111122---121111---111111111111111111-1111111111111112111111111111111111111111111111111111-11111112111111-1111-1111111212111111-11111-1122222211221111111111111112111111111111211111111112111111111111111111121111111----------1-------------------------1112121212122 --11--1-----11111112243444311111111111111111111111221211111211111111-1111211111111111111-12111111111-21112-111-----------------------------------------------------2---------2-1111Q1111151671322131111 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 396 STR:RPRED 99.7 SQ:SECSTR #ccccccEETTEEEEEccGGGHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHTTcccccEEEcHHHHTTccEEEEEEEGGGcTTccTHHHHHHHHHHHHHHTTccEEEEEEcccHHHHHHHHHHHHTTcEEEEEEEHHHHHHTHHHHHHHHHTTcEEEEEccTTccHHHHHHHHHHHHHTTTTTEEEccccccccTTHHHHHHHTTTHHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHGGGTTcTTcEEEEEEEEETcGGGTccccHHHHcEEEEETEEEEEEcccTTccccccccccGGGccccccHHHHHHHHTTccEEEEEEHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHcTTccEEEEEEEccccGGGHHHHHHHHHHTccc DISOP:02AL 1-4| PSIPRED ccccccccccccccccccHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHccccccEEEccccccccccEEEEEEccccccccHHHHHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHHHHHHccccEEEccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccHHHHHHHHHHHHcccccEEEEEcccccccccccccccccccccccccccccccccccccccccccEEccccccccccHHHHHHHHHccEEEEEEcHHHHHHHHHHHHHHcccEEccHHHHHHHHHHHHHHHccccccEEEEEEcccccccHHHHHHHHHccccc //