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Streptococcus pneumoniae G54 (spne4)
Gene : ACF54853.1
DDBJ      :             sugar ABC transporter, permease protein
Swiss-Prot:             

Homologs  Archaea  31/68 : Bacteria  563/915 : Eukaryota  4/199 : Viruses  0/175   --->[See Alignment]
f.58.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   49->277 2r6gG PDBj 6e-17 27.6 %
:RPS:PDB   163->202 3dhwA PDBj 2e-06 25.0 %
:RPS:SCOP  31->277 2r6gG1  f.58.1.1 * 1e-27 23.9 %
:RPS:PFM   56->126 PF09913 * DUF2142 1e-04 32.9 %
:HMM:PFM   92->270 PF00528 * BPD_transp_1 1.1e-27 20.3 172/185  
:BLT:SWISS 1->277 MSMG_STRMU e-109 72.9 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF54853.1 GT:GENE ACF54853.1 GT:PRODUCT sugar ABC transporter, permease protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1718061..1718894) GB:FROM 1718061 GB:TO 1718894 GB:DIRECTION - GB:PRODUCT sugar ABC transporter, permease protein GB:NOTE identified by match to protein family HMM PF00528 GB:PROTEIN_ID ACF54853.1 GB:DB_XREF GI:194356405 LENGTH 277 SQ:AASEQ MKQDERKALIGKYILLVLGSVLILVPLLATLFSSFKPTKDIVDNFFGFPTNFTWDNFSRLLADGIGGYYWNSVVITVLSLLAVMIFIPMAAYSIARNMSKRKAFTIMYTLLILGIFVPFQVIMIPITVMMSKLGLANTFGLILLYLTYAIPQTLFLYVGYIKISIPESLDEAAEIDGANQFTTYFRIIFPMMKPMHATTMIINALWFWNDFMLPLLVLNRDSKMWTLPLFQYNYAGQYFNDYGPSFASYVVGIISITIVYLFFQRHIIAGISNGAVK GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 1->277|MSMG_STRMU|e-109|72.9|277/277| TM:NTM 5 TM:REGION 11->33| TM:REGION 70->92| TM:REGION 107->129| TM:REGION 140->162| TM:REGION 248->270| SEG 15->28|llvlgsvlilvpll| BL:PDB:NREP 1 BL:PDB:REP 49->277|2r6gG|6e-17|27.6|225/284| RP:PDB:NREP 1 RP:PDB:REP 163->202|3dhwA|2e-06|25.0|40/203| RP:PFM:NREP 1 RP:PFM:REP 56->126|PF09913|1e-04|32.9|70/382|DUF2142| HM:PFM:NREP 1 HM:PFM:REP 92->270|PF00528|1.1e-27|20.3|172/185|BPD_transp_1| RP:SCP:NREP 1 RP:SCP:REP 31->277|2r6gG1|1e-27|23.9|243/284|f.58.1.1| OP:NHOMO 3067 OP:NHOMOORG 598 OP:PATTERN 11--31-12333233161223---7--41-2-----------------------11311-1332---- ---1e213334-1123344-423349444443255514575415L*a2DGE5PKN129--767BD4EOYH68666GDA1---4-------------------------1---------------------------9AA77---76221311-11222222212221333--1-----1----CD244FG-953222222331132223SI994822354A2A457787779*111111111111111-1---5411111-12133--11---1-42542324344422666777766664333344443333355---5553G4-3A1111121514D2--1324c-26233E--231--1J--1886I2-1-------111112-B981--313414465466565B---4--3-18O--SSSHWWPjgZTQ22---8F87457D85--------2111--11-----------------------------1---2-133336776665233344894443335562223--2225-23322656A----1--3--------------1-1----1--11111---------222224----------1------------------125-----1-6----------------------1---------16671313333333333-33333334333323333324546611112111111111111115-113332--488888888888-------------1-75D111111-----1--1----------1-11212233333343556----------1222222223154411111111111111-------------------16-1-1------1111111---31---7LGC79RADB-2- -------------2------------------------------------------------------------------------------------------------------------------------------------------------2--------------------------1--------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 83.4 SQ:SECSTR ##############################################ccccccccHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccTTcHcHHHHHHHHTTcccccccHHHHHHHHHHHHHHTTcHHHHHHHHTTTTHHHHHHHHHHHTHHccTTTTTHHHHHTccTHHHHHHTTHHHHHHHHHHHHHHHHHHHHTccHHHHHHccccGGGccHHHHGGGGcccccccHHHHHHHHHHTHHHHHHHHHHHTTTccccccTTTcc DISOP:02AL 1-4,277-278| PSIPRED cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHcccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccc //