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Streptococcus pneumoniae G54 (spne4)
Gene : ACF54871.1
DDBJ      :             ABC transporter, ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  30/68 : Bacteria  871/915 : Eukaryota  194/199 : Viruses  1/175   --->[See Alignment]
c.37.1e.38.1
:623 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   8->386,426->515 2ix3A PDBj 5e-25 32.0 %
:RPS:PDB   6->246 2d3wB PDBj 2e-15 15.3 %
:RPS:PDB   316->358 2d3wD PDBj 2e-07 34.9 %
:RPS:PDB   329->507 2czvA PDBj 7e-14 5.8 %
:RPS:SCOP  5->239 1l7vC  c.37.1.12 * 6e-15 16.7 %
:RPS:SCOP  268->355 1esmA  c.37.1.6 * 9e-09 16.7 %
:RPS:SCOP  326->377 1e69A  c.37.1.12 * 5e-10 21.2 %
:RPS:SCOP  463->514 1f2t.1  c.37.1.12 * 2e-05 31.0 %
:RPS:SCOP  560->620 1gqeA  e.38.1.1 * 2e-04 14.8 %
:HMM:SCOP  4->239 1e69A_ c.37.1.12 * 3e-45 35.5 %
:HMM:SCOP  281->559 1r0wA_ c.37.1.12 * 1.6e-46 25.9 %
:HMM:PFM   44->184 PF00005 * ABC_tran 1.3e-17 36.8 106/118  
:HMM:PFM   356->467 PF00005 * ABC_tran 1.8e-19 39.3 107/118  
:HMM:PFM   320->374 PF03193 * DUF258 3.3e-06 27.7 47/161  
:HMM:PFM   532->613 PF05667 * DUF812 0.0001 23.2 82/594  
:BLT:SWISS 1->619 YFMR_BACSU e-121 42.2 %
:COIL
:REPEAT 2|7->248|320->532
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF54871.1 GT:GENE ACF54871.1 GT:PRODUCT ABC transporter, ATP-binding protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1428244..1430115) GB:FROM 1428244 GB:TO 1430115 GB:DIRECTION - GB:PRODUCT ABC transporter, ATP-binding protein GB:NOTE identified by match to protein family HMM PF00005 GB:PROTEIN_ID ACF54871.1 GB:DB_XREF GI:194356423 LENGTH 623 SQ:AASEQ MSDFIVEKLSKSVGDKTVFRDISFIIHDLDRIGLIGVNGTGKTTLLDVLSGVSGFDGDVSPFSAKNDYQIGYLTQDPDFDDRKTVLDTVLSSELKEIQLIREYELIMLDYSEDKQARLERVMAEMDSLQAWEIESQVKTVLSKLGIQDLSTPVGELSGGLRRRVQLAQVLLGNHDLLLLDEPTNHLDIAIIEWLTLFLKNSKKTVLFITHDRYFLDALSTRIFELDRAGLTEYQGNYQDYVRLKAEQDERDAALLHKKEQLYKQELAWMRRQPQARATKQQARINRFHDLKKEVSGSSAETDLTMNFETSRIGKKVIEFQAVSFAYENKPILQDFNLLVQAKDRIGIVGDNGVGKSTLLNLIAGSLEPTKGQVVIGETVRIAYFSQQIEGLDESKRVINYLQEVAEEVKTSGGSTTSIAELLEQFLFPRSTHGTLIEKLSGGEKKRLYLLKLLLEKPNVLLLDEPTNDLDIATLTVLENFLQGFAGPVLTVSHDRYFLDKVATKILAFEDGKIRPFFGHYTDYLDEKAFETDMANQVQKAEKEKVVKVREDKKRMTYQEKQEWASIEGDIETLEKRIAAIEEEMQANGSDFGKLATLQKELDEKNEALLEKYERYEYLSEFDS GT:EXON 1|1-623:0| BL:SWS:NREP 1 BL:SWS:REP 1->619|YFMR_BACSU|e-121|42.2|614/629| COIL:NAA 22 COIL:NSEG 1 COIL:REGION 564->585| NREPEAT 1 REPEAT 2|7->248|320->532| SEG 160->179|lrrrvqlaqvllgnhdllll| SEG 444->462|kkrlyllklllekpnvlll| SEG 539->553|kaekekvvkvredkk| BL:PDB:NREP 1 BL:PDB:REP 8->386,426->515|2ix3A|5e-25|32.0|390/972| RP:PDB:NREP 3 RP:PDB:REP 6->246|2d3wB|2e-15|15.3|220/244| RP:PDB:REP 316->358|2d3wD|2e-07|34.9|43/243| RP:PDB:REP 329->507|2czvA|7e-14|5.8|176/208| HM:PFM:NREP 4 HM:PFM:REP 44->184|PF00005|1.3e-17|36.8|106/118|ABC_tran| HM:PFM:REP 356->467|PF00005|1.8e-19|39.3|107/118|ABC_tran| HM:PFM:REP 320->374|PF03193|3.3e-06|27.7|47/161|DUF258| HM:PFM:REP 532->613|PF05667|0.0001|23.2|82/594|DUF812| RP:SCP:NREP 5 RP:SCP:REP 5->239|1l7vC|6e-15|16.7|206/231|c.37.1.12| RP:SCP:REP 268->355|1esmA|9e-09|16.7|78/311|c.37.1.6| RP:SCP:REP 326->377|1e69A|5e-10|21.2|52/263|c.37.1.12| RP:SCP:REP 463->514|1f2t.1|2e-05|31.0|50/288|c.37.1.12| RP:SCP:REP 560->620|1gqeA|2e-04|14.8|61/362|e.38.1.1| HM:SCP:REP 4->239|1e69A_|3e-45|35.5|231/308|c.37.1.12|1/2|P-loop containing nucleoside triphosphate hydrolases| HM:SCP:REP 281->559|1r0wA_|1.6e-46|25.9|278/0|c.37.1.12|2/2|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 4944 OP:NHOMOORG 1096 OP:PATTERN --11---1--------3-11---2322211111--1-------1-112-21112--1-------2-11 445-554877745363333-3522353333336565786617656544644455745433785354578934333633645411-11-7766-6331-1346554567151111111111111142222233323322223111614532222223322222232223352132213222222322--1-3126CCECE9AD8ECEBCD669975EFA323B977666665BA5666566566666555555786546654468665455864575565666A78A86668867896867444454444444487744477764987A7778998A9957554544D53253553-99853-31--4552254514355533334645554346644533333333336-4545434457328774674668764433433333333434444444434443546----------333133134221331-----243334443455565445555445455555464554561244433433434434454434354444344443354663646334344443257577567555559642423334444221121111113333433564444665554556555555554555565--4434311-11145664554444444444-4444444444444444444666555664544444444444443644444444-523445444444--33121115644445464555534653423247666645443445555555544455544431223333156665777775677634443443333333224266444411111111713--1-2-11111-1222132132--11331211111-32 1211446-73314565555565556555555555555544444444555555563555444444544444444545525544444454-5645555434354546914P54353246333333233352PQ5-63711--333352322141163322438835343433D3334499F*FBE5794BB555CC8667G ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--- DISOP:02AL 274-302,530-595,623-624| PSIPRED ccEEEEEEEEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEEcccccEEEEEEccccccccccHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHccccHHHccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHcccEEEEEEccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccEEEEEccEEEEccEEEEEccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccccEEEEEcccHHHccccccHHHHHHHHHHHHccccccHHHHHHHHHHccccHHHHcccHHHccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHccccEEEEcccHHHHHHHccEEEEEEccEEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc //