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Streptococcus pneumoniae G54 (spne4)
Gene : ACF54883.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  88/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.110.3
:444 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   302->439 2qkpB PDBj 3e-60 73.9 %
:RPS:PDB   322->441 3c2wD PDBj 1e-05 4.3 %
:RPS:SCOP  331->429 1bywA  d.110.3.6 * 1e-04 18.2 %
:HMM:SCOP  316->426 1mzuA_ d.110.3.1 * 9e-06 22.2 %
:RPS:PFM   8->88 PF04282 * DUF438 1e-10 55.1 %
:HMM:PFM   8->88 PF04282 * DUF438 3e-30 49.4 79/79  
:HMM:PFM   89->153 PF01814 * Hemerythrin 2.6e-05 29.1 55/59  
:HMM:PFM   165->218 PF01814 * Hemerythrin 2.1e-05 18.5 54/59  
:HMM:PFM   324->430 PF08448 * PAS_4 1.7e-06 19.0 105/110  
:BLT:SWISS 245->387 RRFC_ORYSJ 7e-04 28.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF54883.1 GT:GENE ACF54883.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 493988..495322 GB:FROM 493988 GB:TO 495322 GB:DIRECTION + GB:PRODUCT conserved hypothetical protein GB:NOTE identified by match to protein family HMM PF01814; match to protein family HMM PF04282 GB:PROTEIN_ID ACF54883.1 GB:DB_XREF GI:194356435 LENGTH 444 SQ:AASEQ MTDERIHILRDILLELHNGASPESVQERFDATFAGVSAIEISLMEHELMNSDSGVTFEDVMELCDVHANLFKNAIKGVEVLDTEHPGHPVRVFKEENLALRAALIRIRRLLDTYESMEDEEMLAEMRKGLVRQMGLVGQFDIHYQRKEELFFPIMERYGHDSPPKVMWGVDDQIRELFQTALTTAKSLPEVSISSVKEAFEAFATEFESMIFKEESILLMILLESFTQDDWLQIADESDAYGYAIIRPSEKWVPERQSFIEEKIAEEPVQLDTAEGQVQQVIDTPEGHFTITFTPKEKEAVLDRHSQQAFGNGYLSVEQANLILNHLPMEITFVNKEDIFQYYNDNTPADEMIFKRTPSQVGRNVELCHPPKYLDKVKTIMKGLREGTKDKYEMWFKSESRGKFVHITYAAVHDEDGEFQGVLEYVQDIQPYREIDTDYFRGLE GT:EXON 1|1-444:0| BL:SWS:NREP 1 BL:SWS:REP 245->387|RRFC_ORYSJ|7e-04|28.1|139/266| SEG 98->111|lalraalirirrll| SEG 198->208|eafeafatefe| SEG 214->225|eesillmilles| BL:PDB:NREP 1 BL:PDB:REP 302->439|2qkpB|3e-60|73.9|138/138| RP:PDB:NREP 1 RP:PDB:REP 322->441|3c2wD|1e-05|4.3|116/478| RP:PFM:NREP 1 RP:PFM:REP 8->88|PF04282|1e-10|55.1|78/78|DUF438| HM:PFM:NREP 4 HM:PFM:REP 8->88|PF04282|3e-30|49.4|79/79|DUF438| HM:PFM:REP 89->153|PF01814|2.6e-05|29.1|55/59|Hemerythrin| HM:PFM:REP 165->218|PF01814|2.1e-05|18.5|54/59|Hemerythrin| HM:PFM:REP 324->430|PF08448|1.7e-06|19.0|105/110|PAS_4| RP:SCP:NREP 1 RP:SCP:REP 331->429|1bywA|1e-04|18.2|88/110|d.110.3.6| HM:SCP:REP 316->426|1mzuA_|9e-06|22.2|108/0|d.110.3.1|1/1|PYP-like sensor domain (PAS domain)| OP:NHOMO 126 OP:NHOMOORG 95 OP:PATTERN ----1------------------1------------------------------11---11---1--- --1---------------------------------------------------------------------------11--------------11----1---------------------------------------------------------------------------------------11--------------------111-----------------------------------1----12--11112221111--1112--111111----22222222222222-------------222231---1-121-----------1---------11------11-1----11--1--11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--111-----------121------------------------2---1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------1-1111222--- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 346 STR:RPRED 77.9 SQ:SECSTR ######################################################################################TcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHTHHHH##THHHHHHHHTHHHHHTTTcHHHHHHHHHHHHHHHHHHHHHHHTGGGccHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHccHHHHHHHHHHGGGTccccccccc#cccc#####TTcccccGGGccc#cccHHHHHHccHHHHHTTTcccccccccTTTccEEETTEEETcHHHHccEEcTTcEEEEEcTTccEEEEEHHcccHHHHccccccTTcccHHHHcHHHHHHHHHHHHcccccEEEEEEEETTEEEEETEEEEETTEEEEEEEEcccccccTTTTTHHHHHHHHHHHH### DISOP:02AL 1-3,78-84,440-445| PSIPRED ccHHHHHHHHHHHHHHHccccHHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccEEEccccHHcccccccccccHHHHccccccccHHHHHHHHHHHHHHccccccccccHHHHcccccEEcccccccHHHHHHHHHHccccEEEEccccEEEEEccccccccccccccHHHcccEEcccccHHHHHHHHHHHHHHHccccEEEEEEEccccccEEEEEEEEEEEcccccEEHHHHHHHHcHHHHHHHHHHHcccc //