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Streptococcus pneumoniae G54 (spne4)
Gene : ACF54897.1
DDBJ      :             hypothetical protein
Swiss-Prot:RIMP_STRPN   RecName: Full=Ribosome maturation factor rimP;AltName: Full=SP14.3;

Homologs  Archaea  0/68 : Bacteria  495/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.38.2d.52.4
:159 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->159 1ib8A PDBj 1e-86 98.7 %
:RPS:SCOP  5->87 1ib8A2  d.52.4.1 * 2e-17 98.8 %
:RPS:SCOP  88->159 1ib8A1  b.38.2.1 * 4e-18 100.0 %
:HMM:SCOP  3->87 1ib8A2 d.52.4.1 * 7.4e-22 42.4 %
:HMM:SCOP  88->159 1ib8A1 b.38.2.1 * 7e-18 38.9 %
:RPS:PFM   14->155 PF02576 * DUF150 1e-20 45.3 %
:HMM:PFM   15->155 PF02576 * DUF150 3.6e-45 45.3 139/141  
:BLT:SWISS 1->159 RIMP_STRPN 6e-87 100.0 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF54897.1 GT:GENE ACF54897.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 484667..485146 GB:FROM 484667 GB:TO 485146 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:NOTE identified by glimmer; putative GB:PROTEIN_ID ACF54897.1 GB:DB_XREF GI:194356449 LENGTH 159 SQ:AASEQ MDAIATIVELVREVVEPVIEAPFELVDIEYGKIGSDMILSIFVDKPEGITLNDTADLTEIISPVLDTIKPDPFPEQYFLEITSPGLERPLKTKDAVAGAVGKYIHVGLYQAIDKQKVFEGTLLAFEEDELTMEYMDKTRKKTVQIPYSLVSKARLAVKL GT:EXON 1|1-159:0| SW:ID RIMP_STRPN SW:DE RecName: Full=Ribosome maturation factor rimP;AltName: Full=SP14.3; SW:GN Name=rimP; OrderedLocusNames=SP_0552; SW:KW 3D-structure; Complete proteome; Cytoplasm; Ribosome biogenesis. SW:EXACT T SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 1->159|RIMP_STRPN|6e-87|100.0|159/159| GO:SWS:NREP 2 GO:SWS GO:0005737|"GO:cytoplasm"|Cytoplasm| GO:SWS GO:0042254|"GO:ribosome biogenesis"|Ribosome biogenesis| BL:PDB:NREP 1 BL:PDB:REP 1->159|1ib8A|1e-86|98.7|159/164| RP:PFM:NREP 1 RP:PFM:REP 14->155|PF02576|1e-20|45.3|137/138|DUF150| HM:PFM:NREP 1 HM:PFM:REP 15->155|PF02576|3.6e-45|45.3|139/141|DUF150| RP:SCP:NREP 2 RP:SCP:REP 5->87|1ib8A2|2e-17|98.8|83/90|d.52.4.1| RP:SCP:REP 88->159|1ib8A1|4e-18|100.0|72/74|b.38.2.1| HM:SCP:REP 3->87|1ib8A2|7.4e-22|42.4|85/90|d.52.4.1|1/1|YhbC-like, N-terminal domain| HM:SCP:REP 88->159|1ib8A1|7e-18|38.9|72/0|b.38.2.1|1/1|YhbC-like, C-terminal domain| OP:NHOMO 496 OP:NHOMOORG 495 OP:PATTERN -------------------------------------------------------------------- -11------------------------------------------------------------------1---------1-1-11111----------------------------------------------------------------------------------------------------111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111111--1111111111111111111111111111111111111111111111111-1111111111111-11111111111-11111111--1-1-1---------------------11111111111---------111--11111111111-11--1111111111-------------11---------------11---------------1-1--111--1111-111111111111111111------------------------1-1-1111111111-11--111111---1----11111111111111-11-----111111----------111---111111111111111111111111111111--11111------11111111111111111-1111111111111111111111111111111111111111111111111111-111111111111--111111111111111111111111111111111111-1---1111111111111111111---------111111111111111--------------11-----------------------1---------------------1----------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 159 STR:RPRED 100.0 SQ:SECSTR ccHHHHHHHHHHHHHHHHHccccEEEEEEEEEETTEEEEEEEEEccccccHHHHHHHHHHHGGGTTTcccccccccEEEEEEccccccccccHHHHHHHccEEEEEEcccccccccEEEEEEEEEETTEEEEEEEccccEEEEEEccccccccEEEccc DISOP:02AL 1-4| PSIPRED cccHHHHHHHHHHHHHHHHHcccEEEEEEEEEcccccEEEEEEEccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEEccccccccccHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEccEEEEEEEcccEEEEEEEEHHHccEEEEEEEc //