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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55170.1
DDBJ      :             transcriptional regulator, BglG family
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  149/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
a.142.1c.44.2
:541 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   397->476 3czcA PDBj 1e-09 24.1 %
:RPS:SCOP  278->389 1h99A1  a.142.1.1 * 2e-15 21.8 %
:HMM:SCOP  265->389 1h99A1 a.142.1.1 * 2.7e-22 27.0 %
:HMM:SCOP  393->482 1vkrA_ c.44.2.1 * 6.7e-07 20.9 %
:RPS:PFM   321->380 PF00874 * PRD 3e-04 31.7 %
:HMM:PFM   295->383 PF00874 * PRD 4.1e-19 30.7 88/90  
:HMM:PFM   397->453 PF02302 * PTS_IIB 9.9e-08 30.4 56/90  
:HMM:PFM   2->39 PF08221 * HTH_9 0.00044 28.9 38/62  
:BLT:SWISS 25->456 LICR_BACSU 2e-19 24.7 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55170.1 GT:GENE ACF55170.1 GT:PRODUCT transcriptional regulator, BglG family GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1956542..1958167) GB:FROM 1956542 GB:TO 1958167 GB:DIRECTION - GB:PRODUCT transcriptional regulator, BglG family GB:NOTE contains potential frameshift; identified by match to protein family HMM PF00874 GB:PROTEIN_ID ACF55170.1 GB:DB_XREF GI:194356722 LENGTH 541 SQ:AASEQ MFDYRALVILMTLMDHCELSLYELSVKVSLPIKEVKEGIDYLVPYLANKGIVLDKKQGRYSLSNRTKQSLTDIIKSDELVLPKSTRLALIYLYTFCRLDFISNNHYQDFLKVSKNTTLSDIQSLRKIMLDNDLELGYSRAKGYTLHGSEWNKHRLAFQMVSELLESSIGIWGLDYVLSSWGYSLTYDLIDQVVKDYYEKLQLVPIVNQLKVYLFGLVFILCRYQRDVERVCLSETLVSPVIQDITTILLDTVVDLGIIDTVFSEDDYRYITVLLSSCFEGEVDVAPVYFNQLTEAIISRMEDISLLHFKQREGLRENLRRHLIPAYYRLKFGLPSSNEYVLHVKEHYPDLFELVKDSLMPLMDAIDNPIPDSETAYFVIHFGGYLKKADTLPQKCYKAAIICPNGVSSSLMLKENLLALFPQIEFIGTSKIDDLQVKASSDYDMVFSTIKVETEKPNYLVSVMMTEEQAIQLVELVLKDFPNLEYGDFEIEQILNIVKRYGIITQELELRLALKNYLYQKNDRKEIVPVLEQLITKANLSG GT:EXON 1|1-541:0| BL:SWS:NREP 1 BL:SWS:REP 25->456|LICR_BACSU|2e-19|24.7|417/641| RP:PDB:NREP 1 RP:PDB:REP 397->476|3czcA|1e-09|24.1|79/89| RP:PFM:NREP 1 RP:PFM:REP 321->380|PF00874|3e-04|31.7|60/90|PRD| HM:PFM:NREP 3 HM:PFM:REP 295->383|PF00874|4.1e-19|30.7|88/90|PRD| HM:PFM:REP 397->453|PF02302|9.9e-08|30.4|56/90|PTS_IIB| HM:PFM:REP 2->39|PF08221|0.00044|28.9|38/62|HTH_9| GO:PFM:NREP 1 GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00874|IPR011608| RP:SCP:NREP 1 RP:SCP:REP 278->389|1h99A1|2e-15|21.8|110/115|a.142.1.1| HM:SCP:REP 265->389|1h99A1|2.7e-22|27.0|115/115|a.142.1.1|1/1|PTS-regulatory domain, PRD| HM:SCP:REP 393->482|1vkrA_|6.7e-07|20.9|86/0|c.44.2.1|1/1|PTS system, Lactose/Cellobiose specific IIB subunit| OP:NHOMO 301 OP:NHOMOORG 150 OP:PATTERN -------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------113111111222211113634453121221-2--78888811-333233233333332--111----1-----43--22-----2-112323222-12111211212112222222222222111---1111-1-131111111212-6-------1------------------443---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------111-------------------------------------11---1-111111111111111---------1-----------------------------------------------------------------------------------111------------------------------------------------------------------------------------ -------------2----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 79 STR:RPRED 14.6 SQ:SECSTR ############################################################################################################################################################################################################################################################################################################################################################################################################EEEEEccccHHHHHHHHHHHHHTTcccEEEEEEcHHHHHHHG#GGccEEEEETTTGGGcEEEEEccTcHHHHHHHHHHHH################################################################# DISOP:02AL 1-2,388-391,523-524,538-542| PSIPRED cccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEccccEEEcHHHHHHHHHHHHcccccccHHHHHHHHHHHHHcccccccHHHHHHHHcccHHHHHHHHHHHHHHHHHcccEEEEEccccEEEEccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcHHcccHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEcccHHHHHHHHHHHHHHccccEEEEEEEHHHHHcccHHcccEEEEEccccccccEEEEcccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccc //