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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55298.1
DDBJ      :             transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  314/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5c.124.1
:326 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   56->317 2gnpA PDBj e-142 100.0 %
:RPS:PDB   21->53 1bibA PDBj 2e-04 21.2 %
:RPS:PDB   64->315 3bxeA PDBj 5e-30 19.3 %
:RPS:SCOP  1->53 1qbjA  a.4.5.19 * 4e-05 18.9 %
:RPS:SCOP  56->317 2gnpA1  c.124.1.8 * 5e-91 98.1 %
:RPS:PFM   58->312 PF04198 * Sugar-bind 4e-36 33.7 %
:HMM:PFM   59->313 PF04198 * Sugar-bind 7.4e-83 34.1 252/255  
:HMM:PFM   11->49 PF09048 * Cro 1.9e-06 28.2 39/59  
:BLT:SWISS 2->307 SORC_KLEPN 5e-48 35.5 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55298.1 GT:GENE ACF55298.1 GT:PRODUCT transcriptional regulator GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 216333..217313 GB:FROM 216333 GB:TO 217313 GB:DIRECTION + GB:PRODUCT transcriptional regulator GB:NOTE identified by match to protein family HMM PF04198 GB:PROTEIN_ID ACF55298.1 GB:DB_XREF GI:194356850 LENGTH 326 SQ:AASEQ MNQDRNKLLSKIAYLYYIENLNQSQIAAKLGIYRTSISRMLTEARNVGIVKIEIENFDTNMFKLENYVKEKYSLESLEIIPNEFDDTPTILSERISQVAAGVLRNLIDDNMKIGFSWGKSLSNLVDLIHSKSVRNVHFYPLAGGPSHIHAKYHVNTLIYEMSRKFHGECTFMNATIVQENKLLADGILQSRYFENLKNSWKDLDIAVVGIGDFSNKGKHQWLDMLTEDDFKELTKVKTVGEICCRFFDSKGKEVYENLQERTIAISLEDLKNIPQSLAVAYGDTKVSSILSVLRANLVNHLITDKNTILKVLEEDGDLTFREILGE GT:EXON 1|1-326:0| BL:SWS:NREP 1 BL:SWS:REP 2->307|SORC_KLEPN|5e-48|35.5|304/315| BL:PDB:NREP 1 BL:PDB:REP 56->317|2gnpA|e-142|100.0|257/257| RP:PDB:NREP 2 RP:PDB:REP 21->53|1bibA|2e-04|21.2|33/294| RP:PDB:REP 64->315|3bxeA|5e-30|19.3|244/248| RP:PFM:NREP 1 RP:PFM:REP 58->312|PF04198|4e-36|33.7|252/254|Sugar-bind| HM:PFM:NREP 2 HM:PFM:REP 59->313|PF04198|7.4e-83|34.1|252/255|Sugar-bind| HM:PFM:REP 11->49|PF09048|1.9e-06|28.2|39/59|Cro| GO:PFM:NREP 2 GO:PFM GO:0030246|"GO:carbohydrate binding"|PF04198|IPR007324| GO:PFM GO:0030528|"GO:transcription regulator activity"|PF04198|IPR007324| RP:SCP:NREP 2 RP:SCP:REP 1->53|1qbjA|4e-05|18.9|53/65|a.4.5.19| RP:SCP:REP 56->317|2gnpA1|5e-91|98.1|262/262|c.124.1.8| OP:NHOMO 523 OP:NHOMOORG 314 OP:PATTERN -------------------------------------------------------------------- -----11-----1------------3-------222-2-1---1222--111-11--1-----2--1111-------------------------------------------------------------------11--------------------------------------------111------11222222221222222213341222----1--2222221111111111111111111111-111-111-1-2311-11--1-11--11111111--111111111111111111111111121---111112-1-333332312112--1212-1-----------1---1--1111---------------1--11--------1-221221127---------15--844264387376-----3-1222231----------------2----------------------------------------11111112222--11222211-11--------11----1---14-----------------------------1-1-111-----------------------------------------------31-----11------1-------------------------1-1-1--11111111---111-121-1-122--1--544321111--------1--------111111---344554435545----------------1----21----1--112----------1--------1------1-1----------11111111111111-------------------------------------------------------------1----3------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 324 STR:RPRED 99.4 SQ:SECSTR #cHHHHHHHHHHHHccccccccHHHHHHHHTccHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccEEEEEcccTTTccTTHHHHHHHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccTTccEEEEEEccccTTccGGGcHHHHHHHHHHHTTcEEccccccccccHHHHHHHHHcHHHHHHHHHHHTcccEEEEccEEHcHHHHHHHHTTccHHHHHHHHHTTccEEETTEEEcTTccEEETTEEcccccccGGGGGGccEEEEEcccGGGHHHHHHHTTcccccEEEEEHHHHHHHHTcccccTTcEEEE# DISOP:02AL 1-4,326-327| PSIPRED ccHHHHHHHHHHHHHHHHccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHccccccccEEEEEcccccccccccccHHHHHHHHHHHHccEEEEEEcccccccHHHHHHHHHcHHHHHHHHHHHHccEEEEEcccccccccccccccccHHHHHHHHHcccEEEEEEccccccccEEcccccccEEcccHHHHHcccEEEEEEccccHHHHHHHHHHcccccEEEccHHHHHHHHHHHccccHHHHHcc //