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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55403.1
DDBJ      :             PTS system,  IIBC component
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  259/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.44.2
:559 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   456->536 3czcA PDBj 1e-04 13.7 %
:HMM:SCOP  455->561 1iibA_ c.44.2.1 * 4.4e-10 21.4 %
:RPS:PFM   134->351 PF02378 * PTS_EIIC 4e-10 28.7 %
:RPS:PFM   457->512 PF02302 * PTS_IIB 1e-05 42.9 %
:HMM:PFM   28->353 PF02378 * PTS_EIIC 9.8e-71 27.7 310/321  
:HMM:PFM   457->550 PF02302 * PTS_IIB 3.8e-14 27.3 88/90  
:BLT:SWISS 1->557 PTLCB_STAAW e-127 43.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55403.1 GT:GENE ACF55403.1 GT:PRODUCT PTS system, IIBC component GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 423931..425610 GB:FROM 423931 GB:TO 425610 GB:DIRECTION + GB:PRODUCT PTS system, IIBC component GB:NOTE identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00410 GB:PROTEIN_ID ACF55403.1 GB:DB_XREF GI:194356955 LENGTH 559 SQ:AASEQ MDKLVAAIEKQQGKFEKISTNNYMMAIKDGFIATMPLIMFSSFLMIIIMIPKNFGVELPSPAIVWMRKVYMLTMGVLGIIVSGTVGKSLVGNVNRKMPHGKVINDISAMLAAICSYLVLTVTLVVDEKTGSTSLSTNYLGSQGLITSFVSAFITVNVYRFCIKRDITIHLPKEVPGAISQAFRDIFPFSFVLLISGLLDIVSRFSLDVPFAQVFQQLLTPIFKGAESYPAMMLIWFMCALLWFVGIHGPSIVLPAVTALQLSNMEENAQLLANGQFPYHSLTPNFGNYIAAIGGTGATFVVPFILIFFMRSKQLKSVGKATITPVLFAVNEPLLFGMPVILNPYLFVPFLMTPPVNVFLGKVFIDFFGMNGFYIQLPWTFPGPLGLLIGTNFQLISFVFLSLILVVDILIYLPFCRAYDRQLLVKEDIASSNDIILEEDTSEIIPGEIDEIKSKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKNPSKALQFVLEHYQAV GT:EXON 1|1-559:0| BL:SWS:NREP 1 BL:SWS:REP 1->557|PTLCB_STAAW|e-127|43.7|552/570| TM:NTM 10 TM:REGION 29->51| TM:REGION 69->91| TM:REGION 104->126| TM:REGION 138->160| TM:REGION 194->216| TM:REGION 234->256| TM:REGION 288->310| TM:REGION 318->340| TM:REGION 349->370| TM:REGION 388->410| SEG 37->50|limfssflmiiimi| RP:PDB:NREP 1 RP:PDB:REP 456->536|3czcA|1e-04|13.7|73/89| RP:PFM:NREP 2 RP:PFM:REP 134->351|PF02378|4e-10|28.7|202/313|PTS_EIIC| RP:PFM:REP 457->512|PF02302|1e-05|42.9|56/86|PTS_IIB| HM:PFM:NREP 2 HM:PFM:REP 28->353|PF02378|9.8e-71|27.7|310/321|PTS_EIIC| HM:PFM:REP 457->550|PF02302|3.8e-14|27.3|88/90|PTS_IIB| GO:PFM:NREP 6 GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF02378|IPR003352| GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02378|IPR003352| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02378|IPR003352| GO:PFM GO:0016020|"GO:membrane"|PF02378|IPR003352| GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02302|IPR003501| GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02302|IPR003501| HM:SCP:REP 455->561|1iibA_|4.4e-10|21.4|103/103|c.44.2.1|1/1|PTS system, Lactose/Cellobiose specific IIB subunit| OP:NHOMO 689 OP:NHOMOORG 259 OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------1--------------2------------------------------------------------------------------------------------------------------------------4444444442445444316433444-1214-49ABAA711-11111111111111111218711581-9159911783-62323341122535422666767856562333333333333445---5444-2-291111111211-8-----1---1-1-1------------222---2------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------1-------1--1----------------------------------------------24--------1------1111-1-1---1-------------3512-611112121222-11122112221211111127884411112111111111111113-1-1-11--4111-1111111-----------------------------111------------------1-1-------------------11142222221-33-----------------1------111-1-------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 73 STR:RPRED 13.1 SQ:SECSTR #######################################################################################################################################################################################################################################################################################################################################################################################################################################################################EEEEEEcccHHHHHHHHHHHHHHTTcccEEEEEEc##HHHHHHHGGGccEEEEETTTGGGT######TTccccEEEEEccT####################### DISOP:02AL 1-1,422-438,559-560| PSIPRED ccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHccEEEEEcccHHHEEcccHHHHHHHHHHHHHcc //