Streptococcus pneumoniae G54 (spne4)
Gene : ACF55403.1
DDBJ : PTS system, IIBC component
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 259/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
c.44.2
:559 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB 456->536 3czcA PDBj 1e-04 13.7 %
:HMM:SCOP 455->561 1iibA_ c.44.2.1 * 4.4e-10 21.4 %
:RPS:PFM 134->351 PF02378 * PTS_EIIC 4e-10 28.7 %
:RPS:PFM 457->512 PF02302 * PTS_IIB 1e-05 42.9 %
:HMM:PFM 28->353 PF02378 * PTS_EIIC 9.8e-71 27.7 310/321
:HMM:PFM 457->550 PF02302 * PTS_IIB 3.8e-14 27.3 88/90
:BLT:SWISS 1->557 PTLCB_STAAW e-127 43.7 %
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55403.1
GT:GENE ACF55403.1
GT:PRODUCT PTS system, IIBC component
GT:DATABASE GIB00761CH01
GT:ORG spne4
GB:ACCESSION GIB00761CH01
GB:LOCATION 423931..425610
GB:FROM 423931
GB:TO 425610
GB:DIRECTION +
GB:PRODUCT PTS system, IIBC component
GB:NOTE identified by match to protein family HMM PF02302; match to protein family HMM PF02378; match to protein family HMM TIGR00410
GB:PROTEIN_ID ACF55403.1
GB:DB_XREF GI:194356955
LENGTH 559
SQ:AASEQ MDKLVAAIEKQQGKFEKISTNNYMMAIKDGFIATMPLIMFSSFLMIIIMIPKNFGVELPSPAIVWMRKVYMLTMGVLGIIVSGTVGKSLVGNVNRKMPHGKVINDISAMLAAICSYLVLTVTLVVDEKTGSTSLSTNYLGSQGLITSFVSAFITVNVYRFCIKRDITIHLPKEVPGAISQAFRDIFPFSFVLLISGLLDIVSRFSLDVPFAQVFQQLLTPIFKGAESYPAMMLIWFMCALLWFVGIHGPSIVLPAVTALQLSNMEENAQLLANGQFPYHSLTPNFGNYIAAIGGTGATFVVPFILIFFMRSKQLKSVGKATITPVLFAVNEPLLFGMPVILNPYLFVPFLMTPPVNVFLGKVFIDFFGMNGFYIQLPWTFPGPLGLLIGTNFQLISFVFLSLILVVDILIYLPFCRAYDRQLLVKEDIASSNDIILEEDTSEIIPGEIDEIKSKELKVLVLCAGSGTSAQLANAINEGANLTEVRVIANSGAYGAHYDIMGVYDLIILAPQVRSYYREMKVDAERLGIQIVATRGMEYIHLTKNPSKALQFVLEHYQAV
GT:EXON 1|1-559:0|
BL:SWS:NREP 1
BL:SWS:REP 1->557|PTLCB_STAAW|e-127|43.7|552/570|
TM:NTM 10
TM:REGION 29->51|
TM:REGION 69->91|
TM:REGION 104->126|
TM:REGION 138->160|
TM:REGION 194->216|
TM:REGION 234->256|
TM:REGION 288->310|
TM:REGION 318->340|
TM:REGION 349->370|
TM:REGION 388->410|
SEG 37->50|limfssflmiiimi|
RP:PDB:NREP 1
RP:PDB:REP 456->536|3czcA|1e-04|13.7|73/89|
RP:PFM:NREP 2
RP:PFM:REP 134->351|PF02378|4e-10|28.7|202/313|PTS_EIIC|
RP:PFM:REP 457->512|PF02302|1e-05|42.9|56/86|PTS_IIB|
HM:PFM:NREP 2
HM:PFM:REP 28->353|PF02378|9.8e-71|27.7|310/321|PTS_EIIC|
HM:PFM:REP 457->550|PF02302|3.8e-14|27.3|88/90|PTS_IIB|
GO:PFM:NREP 6
GO:PFM GO:0005351|"GO:sugar:hydrogen symporter activity"|PF02378|IPR003352|
GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02378|IPR003352|
GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02378|IPR003352|
GO:PFM GO:0016020|"GO:membrane"|PF02378|IPR003352|
GO:PFM GO:0008982|"GO:protein-N(PI)-phosphohistidine-sugar phosphotransferase activity"|PF02302|IPR003501|
GO:PFM GO:0009401|"GO:phosphoenolpyruvate-dependent sugar phosphotransferase system"|PF02302|IPR003501|
HM:SCP:REP 455->561|1iibA_|4.4e-10|21.4|103/103|c.44.2.1|1/1|PTS system, Lactose/Cellobiose specific IIB subunit|
OP:NHOMO 689
OP:NHOMOORG 259
OP:PATTERN -------------------------------------------------------------------- ---------------------------------------------------------------1--------------2------------------------------------------------------------------------------------------------------------------4444444442445444316433444-1214-49ABAA711-11111111111111111218711581-9159911783-62323341122535422666767856562333333333333445---5444-2-291111111211-8-----1---1-1-1------------222---2------------------------------------------------------------------------------------------------------------------------------------------------------------------11------------------------------------1-------1--1----------------------------------------------24--------1------1111-1-1---1-------------3512-611112121222-11122112221211111127884411112111111111111113-1-1-11--4111-1111111-----------------------------111------------------1-1-------------------11142222221-33-----------------1------111-1-------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 73
STR:RPRED 13.1
SQ:SECSTR #######################################################################################################################################################################################################################################################################################################################################################################################################################################################################EEEEEEcccHHHHHHHHHHHHHHTTcccEEEEEEc##HHHHHHHGGGccEEEEETTTGGGT######TTccccEEEEEccT#######################
DISOP:02AL 1-1,422-438,559-560|
PSIPRED ccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHccccccHHHHHHHHHHHHHHHHHHHcccccccEEEEcccccccHHHHHHHHHHHHHHHHHHHHHcccEEEcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHccHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccccEEEccccccHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHcccEEEEEcccHHHHHHHHHHHHHHHHccccEEEEccccHHHHHHHccccEEEEEHHHHHHHHHHHHHHHHHccEEEEEcccHHHEEcccHHHHHHHHHHHHHcc
//
[GTOP]
