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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55538.1
DDBJ      :             conserved hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  175/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
b.36.1d.14.1
:345 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   124->215 2kjkA PDBj 4e-16 39.1 %
:RPS:PDB   116->192 2cssA PDBj 5e-06 19.5 %
:RPS:SCOP  152->196 1y8tA1  b.36.1.4 * 1e-05 26.7 %
:RPS:SCOP  202->345 1rr9A  d.14.1.10 * 2e-12 24.8 %
:HMM:SCOP  99->196 1lcyA1 b.36.1.4 * 2.1e-05 23.2 %
:HMM:SCOP  152->346 1rreA_ d.14.1.10 * 1.5e-24 28.7 %
:RPS:PFM   231->341 PF05362 * Lon_C 6e-07 34.0 %
:HMM:PFM   231->297 PF05362 * Lon_C 4.3e-09 35.4 65/205  
:HMM:PFM   302->322 PF07554 * FIVAR 0.00031 42.9 21/51  
:BLT:SWISS 2->341 YLBL_BACSU 5e-51 38.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55538.1 GT:GENE ACF55538.1 GT:PRODUCT conserved hypothetical protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1785254..1786291) GB:FROM 1785254 GB:TO 1786291 GB:DIRECTION - GB:PRODUCT conserved hypothetical protein GB:PROTEIN_ID ACF55538.1 GB:DB_XREF GI:194357090 LENGTH 345 SQ:AASEQ MKKKIRWPLYVIAALIVTFLAFVVPLPYYIEVPGGSEDIRQVLKVNDTEDKEAGAYQFVTVGVQHATLAHMIYAWLTPFTDIRSAQETTGGSSDVEFMRINQFYMQTSQNMAKYQGLKTAGKDIELKYFGVYVLNVTDNSTFKGILNISDTVTAVNDQTFDSSKDLIDYVSSQKLGDSVKVTYEEDGQTKSAEGKIITLENGKNGIGIGLIDRTEVISNVPISFSTAGIGGPSAGLMFSLAIYTQIAHPDLRNGRIVAGTGTIDRDGNVGDIGGIDKKVVASARAGAAIFFAPDNPVSEEEQKAHPDAKNNYQTALEAAKTIKTDMKIVPVKTLQDAIDYLKNNP GT:EXON 1|1-345:0| BL:SWS:NREP 1 BL:SWS:REP 2->341|YLBL_BACSU|5e-51|38.2|325/341| TM:NTM 1 TM:REGION 6->28| SEG 281->292|asaragaaiffa| BL:PDB:NREP 1 BL:PDB:REP 124->215|2kjkA|4e-16|39.1|92/100| RP:PDB:NREP 1 RP:PDB:REP 116->192|2cssA|5e-06|19.5|77/121| RP:PFM:NREP 1 RP:PFM:REP 231->341|PF05362|6e-07|34.0|94/186|Lon_C| HM:PFM:NREP 2 HM:PFM:REP 231->297|PF05362|4.3e-09|35.4|65/205|Lon_C| HM:PFM:REP 302->322|PF07554|0.00031|42.9|21/51|FIVAR| GO:PFM:NREP 3 GO:PFM GO:0004176|"GO:ATP-dependent peptidase activity"|PF05362|IPR008269| GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF05362|IPR008269| GO:PFM GO:0006508|"GO:proteolysis"|PF05362|IPR008269| RP:SCP:NREP 2 RP:SCP:REP 152->196|1y8tA1|1e-05|26.7|45/88|b.36.1.4| RP:SCP:REP 202->345|1rr9A|2e-12|24.8|125/182|d.14.1.10| HM:SCP:REP 99->196|1lcyA1|2.1e-05|23.2|95/100|b.36.1.4|1/1|PDZ domain-like| HM:SCP:REP 152->346|1rreA_|1.5e-24|28.7|178/182|d.14.1.10|1/1|Ribosomal protein S5 domain 2-like| OP:NHOMO 178 OP:NHOMOORG 175 OP:PATTERN -------------------------------------------------------------------- ----111111111111111-111111111111111111111--1--111---111--1--111111112111111111------------------------------------------------------------------------------------------------------------------11111111111111111111111111111111111111112--------------------1111111111111111111-11111111111111111111111111111111111111112111111111----------------------------1----------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 142 STR:RPRED 41.2 SQ:SECSTR #######################################################################################ccccccccccccEEEEEEEcccTTTccccEEEEEEEEcTTccEEEEEEEcTTcHHHccccTTcEEEEEcccccTcHHHHHHHHHHGGGcccEEEEEEEccccccccHHTccccTccccccEEEcccccEEEEEccTTccEEE#################################################################################################################### DISOP:02AL 1-2,86-96,345-346| PSIPRED cccEEHHHHHHHHHHHHHHHHHcccccHHHHccccccccccEEEEccccccccccEEEEEEEcccccHHHHHHHHcccccccccHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEcccEEEEEEccccccccccccccEEEEEccEEcccHHHHHHHHHHcccccEEEEEEEEccEEEEEEEEEEcccccccccccccccccccccccccEEEEcccccccHHHHHHHHHHHHHcccccccccEEEEEEEEcccccEEEEccHHHHHHHHHHccccEEEEccccccHHHHcccccccccHHHHHHHHHHHcccEEEEEEccHHHHHHHHHccc //