[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptococcus pneumoniae G54 (spne4)
Gene : ACF55548.1
DDBJ      :             response regulator TCS07
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  634/915 : Eukaryota  7/199 : Viruses  0/175   --->[See Alignment]
a.24.16a.4.1c.23.1d.169.1
:428 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->112 3jteA PDBj 1e-15 38.3 %
:BLT:PDB   341->425 2k9sA PDBj 1e-05 27.1 %
:RPS:PDB   1->56 2dvyD PDBj 4e-06 11.3 %
:RPS:PDB   30->139 3cwoX PDBj 1e-21 21.8 %
:RPS:PDB   324->423 1bl0A PDBj 2e-22 19.0 %
:RPS:SCOP  3->120 1tmyA  c.23.1.1 * 3e-21 31.9 %
:RPS:SCOP  138->183 1wk1A  d.169.1.1 * 1e-05 32.6 %
:RPS:SCOP  284->424 1v4aA1  a.24.16.4 * 3e-21 11.3 %
:HMM:SCOP  1->121 1s8nA_ c.23.1.1 * 5.8e-31 39.0 %
:HMM:SCOP  374->423 1d5yA2 a.4.1.8 * 3.1e-13 42.0 %
:RPS:PFM   4->112 PF00072 * Response_reg 2e-17 39.6 %
:RPS:PFM   383->421 PF00165 * HTH_AraC 3e-05 46.2 %
:HMM:PFM   4->113 PF00072 * Response_reg 1.1e-24 36.1 108/112  
:HMM:PFM   384->422 PF00165 * HTH_AraC 9.9e-13 42.1 38/42  
:BLT:SWISS 1->126,324->423 Y2406_STAEQ 1e-23 37.1 %
:BLT:SWISS 158->231 KPRS_THEVO 7e-04 24.3 %
:PROS 375->417|PS00041|HTH_ARAC_FAMILY_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55548.1 GT:GENE ACF55548.1 GT:PRODUCT response regulator TCS07 GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 159601..160887 GB:FROM 159601 GB:TO 160887 GB:DIRECTION + GB:PRODUCT response regulator TCS07 GB:NOTE identified by match to protein family HMM PF00072; match to protein family HMM PF00165 GB:PROTEIN_ID ACF55548.1 GB:DB_XREF GI:194357100 LENGTH 428 SQ:AASEQ MYKVLLVDDEYMVTEGLKRLIPFDKWDMEVVATAGHADEALEYVQENPVDVIISDVNMPDKTGLDMIREMKEILPDAAYILLSGYQEFDYVKRAMNLSVVDYLVKPVDKVELGNLLEKIAGQLGERGKKSQTLSQELDEAGFVSYLGDKENWWIGLSKEKQGSFTIPYYVLGQDWQIFISGQPLDGLVVTPFEAPYQEHFERWKLNAEKTLFYGSVNLQQSESLFAYYEPIYRVIIQGNLNQIVEELNLLEKVVLENTPRVPITKQLFIQFVMDVFHLFEHLKADDLTDIVKTIHAIQSFDELVPYIKETLTSFFGQYRMNENVASVLEVIGRDYQKELSLKDISKALFINPVYLGQLIKRETDSTFAELLNKQRIKAAQQLLLSTSDSIEDICYAVGYSNLGYFYKVFRKLCGKSPKAYRKQVETIL GT:EXON 1|1-428:0| BL:SWS:NREP 2 BL:SWS:REP 1->126,324->423|Y2406_STAEQ|1e-23|37.1|223/251| BL:SWS:REP 158->231|KPRS_THEVO|7e-04|24.3|74/286| PROS 375->417|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| SEG 244->257|veelnllekvvlen| BL:PDB:NREP 2 BL:PDB:REP 3->112|3jteA|1e-15|38.3|107/126| BL:PDB:REP 341->425|2k9sA|1e-05|27.1|85/107| RP:PDB:NREP 3 RP:PDB:REP 1->56|2dvyD|4e-06|11.3|53/214| RP:PDB:REP 30->139|3cwoX|1e-21|21.8|110/236| RP:PDB:REP 324->423|1bl0A|2e-22|19.0|100/116| RP:PFM:NREP 2 RP:PFM:REP 4->112|PF00072|2e-17|39.6|106/111|Response_reg| RP:PFM:REP 383->421|PF00165|3e-05|46.2|39/40|HTH_AraC| HM:PFM:NREP 2 HM:PFM:REP 4->113|PF00072|1.1e-24|36.1|108/112|Response_reg| HM:PFM:REP 384->422|PF00165|9.9e-13|42.1|38/42|HTH_AraC| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0003700|"GO:transcription factor activity"|PF00165|IPR000005| GO:PFM GO:0005622|"GO:intracellular"|PF00165|IPR000005| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00165|IPR000005| GO:PFM GO:0043565|"GO:sequence-specific DNA binding"|PF00165|IPR000005| RP:SCP:NREP 3 RP:SCP:REP 3->120|1tmyA|3e-21|31.9|116/118|c.23.1.1| RP:SCP:REP 138->183|1wk1A|1e-05|32.6|46/150|d.169.1.1| RP:SCP:REP 284->424|1v4aA1|3e-21|11.3|141/151|a.24.16.4| HM:SCP:REP 1->121|1s8nA_|5.8e-31|39.0|118/190|c.23.1.1|1/1|CheY-like| HM:SCP:REP 374->423|1d5yA2|3.1e-13|42.0|50/0|a.4.1.8|1/1|Homeodomain-like| OP:NHOMO 2514 OP:NHOMOORG 649 OP:PATTERN -----------------------11----------1-------11--2--1-1--------------- 37332--1---2-1122----4--33-----2455521-13--121-------11-----2312331534-1------1--1---3313342-5-----4-5335E6G3B1------1--11111---21-1118-44597432816-12--1-2---------1-15691------------22111224354667776593748654IKBB48AA8468B623554554G*122222222222222-112163-2113----3311221-1-21---3333434411333233333333333333333333524---2222DI85K7677767566K5113564R353147A13AC55517324513J-23553-11--------312--1-3-1-22222222212--------21--12--3211222---12--1------411-----------1-412------------------------------11111----14446453555444666676245652553--2225712223574224244231---------125273KLG569419FAAC-GDFFHED6A668787985111111111----------8B411--116444424213111122111111223124------2------32321113444333443-443344334345534344455521121544655555544546524233343--211111111111---111111111111D23111--2---------22222222313355455355342452634---------13337666663433311212112231111---31155331111111131---------------------------1121111115B- -------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------L122-21------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 322 STR:RPRED 75.2 SQ:SECSTR cEEEEEEcccHHHHHHHHHHHHTHHccEEEEEccccccTTHHHHHHHccccEEEEcccTTccHHHHHHHHHHHcccccEEEEccccTHHHHHHHHHTTccEEEEcHHHHHcTHHHHHHHHHHTGGGEEEEEEEEEccccHGGTTTHHHHHHHHHHHHHHHHHHcHHHHHHHTTTccccEEEEEccccccTHTccTTHHHHHcccTTEEEEEEEEEccccc#######################################################################################################HHHHHHHHHTTTTcccccHHHHHHccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHTTcccHHHHHHHHHHHHcccHHHHHTccc### DISOP:02AL 123-139,426-429| PSIPRED ccEEEEEcccHHHHHHHHHHHHHccccEEEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccccEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHccccccEEccccccccEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHcccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHccccccHHHHHHHHHHcccHHHHHHHHHHcc //