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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55561.1
DDBJ      :             integrase/recombinase, phage integrase family
Swiss-Prot:             

Homologs  Archaea  41/68 : Bacteria  732/915 : Eukaryota  0/199 : Viruses  1/175   --->[See Alignment]
a.60.9d.163.1
:321 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->191 1p7dA PDBj 5e-04 26.9 %
:BLT:PDB   164->317 1a0pA PDBj 5e-13 35.3 %
:RPS:PDB   46->309 5crxA PDBj 6e-25 13.3 %
:RPS:SCOP  43->127 1crxA1  a.60.9.1 * 7e-08 10.7 %
:RPS:SCOP  158->304 1a0pA2  d.163.1.1 * 2e-21 29.9 %
:HMM:SCOP  142->319 4crxA2 d.163.1.1 * 5.2e-45 34.3 %
:RPS:PFM   164->307 PF00589 * Phage_integrase 7e-18 42.3 %
:HMM:PFM   154->310 PF00589 * Phage_integrase 6.9e-38 33.5 155/173  
:HMM:PFM   55->125 PF02899 * Phage_integr_N 4.4e-11 34.3 70/84  
:HMM:PFM   30->79 PF06385 * Baculo_LEF-11 0.00046 25.5 47/95  
:BLT:SWISS 44->313 XERC_STAAB 3e-27 30.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55561.1 GT:GENE ACF55561.1 GT:PRODUCT integrase/recombinase, phage integrase family GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 788680..789645 GB:FROM 788680 GB:TO 789645 GB:DIRECTION + GB:PRODUCT integrase/recombinase, phage integrase family GB:NOTE identified by match to protein family HMM PF00589; match to protein family HMM PF02899 GB:PROTEIN_ID ACF55561.1 GB:DB_XREF GI:194357113 LENGTH 321 SQ:AASEQ MESKVTIIMQEMLPLLNNEQLLALRESLEHHLVDGKKQQKYSNNNLLQLFITAKQVEGCSSKTIRYYQRTIENLFNAIKESVTQLTTDDLRSYLANYQSEKDCSKANLDNIRRILSSFFAWLEQEEYIIKNPIRRIKKIKTEQNVKETYTDEHLEIMRDNCENLRDLAIIDLLASTGMRVGELVQLNRSDIDFENRECVVFGKGKKERPVYFDARTKIHLRNYLNDRKDSHPALFVTLVGKAQRLGIAGVEIRLRKLGDKLGIQKVHPHKFRRTLATKAIDKGMPIEQVQKLLGHSKIDTTLAYAMVNQNNVKHSHQKFIS GT:EXON 1|1-321:0| BL:SWS:NREP 1 BL:SWS:REP 44->313|XERC_STAAB|3e-27|30.7|267/298| SEG 10->24|qemlpllnneqllal| SEG 128->140|iiknpirrikkik| BL:PDB:NREP 2 BL:PDB:REP 58->191|1p7dA|5e-04|26.9|130/279| BL:PDB:REP 164->317|1a0pA|5e-13|35.3|150/271| RP:PDB:NREP 1 RP:PDB:REP 46->309|5crxA|6e-25|13.3|263/297| RP:PFM:NREP 1 RP:PFM:REP 164->307|PF00589|7e-18|42.3|142/168|Phage_integrase| HM:PFM:NREP 3 HM:PFM:REP 154->310|PF00589|6.9e-38|33.5|155/173|Phage_integrase| HM:PFM:REP 55->125|PF02899|4.4e-11|34.3|70/84|Phage_integr_N| HM:PFM:REP 30->79|PF06385|0.00046|25.5|47/95|Baculo_LEF-11| GO:PFM:NREP 3 GO:PFM GO:0003677|"GO:DNA binding"|PF00589|IPR002104| GO:PFM GO:0006310|"GO:DNA recombination"|PF00589|IPR002104| GO:PFM GO:0015074|"GO:DNA integration"|PF00589|IPR002104| RP:SCP:NREP 2 RP:SCP:REP 43->127|1crxA1|7e-08|10.7|84/110|a.60.9.1| RP:SCP:REP 158->304|1a0pA2|2e-21|29.9|147/180|d.163.1.1| HM:SCP:REP 142->319|4crxA2|5.2e-45|34.3|178/212|d.163.1.1|1/1|DNA breaking-rejoining enzymes| OP:NHOMO 1631 OP:NHOMOORG 774 OP:PATTERN --1111111111111-1---------------11111--55731-111-1511-1111111211---- 3251122122222222222-2322312222217324112-1131-1112111223122111-22133---1222226532222---11332422222--422253222221222222111222222222222223211111236223-51-1------1----1---338--------------2--1222332454552353475336323322233856923332224243222222222222222233222222222-32222222234222211211111111112112322222211222111111111--111-1-1383344323423432313322112321321644449735143222242-2126122-21222--22----1311-----------1--1----1-1211----2-3---21-1---11-----23-111111115--1--112221211-222111111111221112222-1-1111---12222222222222222222222222233111131221212322123122222-2222222222-111242-223214221222322222211222222--------------------2-1-132232321-23232332232223222323221--23122------23442322222222222-222222222222222222222282A832222232222222223222222222-222222222222--12---------222222221212111-22221112111212222222332323333224322222222222225222221222322222222222222--11332222--------222------1--1--------1------11-1112111262 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- --------------------------------------------------------------------------------------------------1---------------------------------------------------------------------------- STR:NPRED 288 STR:RPRED 89.7 SQ:SECSTR ###############################EEEEEEEEEEEcHHHHHHHHHHHHTGGccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHTccHHHHHHHHHHHHHHHHTcccccGGGcHHHHHHHHHHHHHHHTTTccccccccccccHHHHHHHHHHHHHHHHTccHHHHHHcccTTcccccTTccccccccHHHHHHHHHHHHHTccccccTTccccccccccccHHHHHHHHHHHHHHHHccccccccccccTTHHHHHHHHHHHHccccHHHHHHTTTcccTTcccccHHHHHccccHHHHHH## DISOP:02AL 1-2,32-32,34-34| PSIPRED cccEEEEEEEccHHHccHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccHHHccHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHcccHHHHHcccHHHEEccccEEEEEcccccEEEEEccHHHHHHHHHHHHHcccccccEEEEEccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHccccHHHHHHHHccccHHHHHHHHHccHHHHHHHHHHHcc //