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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55592.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  69/915 : Eukaryota  16/199 : Viruses  0/175   --->[See Alignment]
b.18.1c.1.8
:559 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   4->449 3eypA PDBj 1e-73 38.5 %
:RPS:PDB   356->451 3cqoA PDBj 4e-06 11.5 %
:RPS:PDB   476->545 3e9tC PDBj 2e-04 22.7 %
:RPS:SCOP  34->312 1hl8A2  c.1.8.11 * 1e-34 27.2 %
:RPS:SCOP  326->451 1tvgA  b.18.1.9 * 5e-08 13.0 %
:HMM:SCOP  1->320 1hl9A2 c.1.8.11 * 5.8e-79 34.9 %
:HMM:SCOP  327->451 1k3iA2 b.18.1.1 * 2.1e-10 22.4 %
:RPS:PFM   9->318 PF01120 * Alpha_L_fucos 2e-47 46.5 %
:HMM:PFM   46->319 PF01120 * Alpha_L_fucos 1.3e-32 28.8 229/347  
:HMM:PFM   464->528 PF03160 * Calx-beta 0.00091 20.0 65/101  
:BLT:SWISS 23->448 FUCO1_ARATH 1e-97 42.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55592.1 GT:GENE ACF55592.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION complement(1973595..1975274) GB:FROM 1973595 GB:TO 1975274 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:NOTE identified by glimmer; putative GB:PROTEIN_ID ACF55592.1 GB:DB_XREF GI:194357144 LENGTH 559 SQ:AASEQ MKKIKPHGPLPSQTQLAYLGDELAAFIHFGPNTFYDQEWGTGQEDPERFNPSQLDAREWVRVLKETGFKKLILVVKHHDGFVLYPTAHTDYSVKVSPWRRGKGDLLLEVSQAATEFDMDMGVYLSSWDAHSPLYHVDREADYNAYYLAQLKEILSNPNYGNAGKFAEVWMDGARGEGAQKVNYEFEKWFETIRDLQGDCLIFSTEGTSIRWIGNERGYAGDPLWQKVNPDKLGTEAELDYLQHGDPSGTIFSIGEADVSIRPGWFYHEDQDPKSLEELVEIYFHSVGRGTPLLLNIPPNQAGLFDAKDIERLYEFATYRNELYKEDLALGAEVSGPALSADFACRHLTDGLETSSWASDADLPIQLELDLGFPKTFDVIELREDLKLGQRIAAFHVQVEVDGVWQEFGRGFTVGHKRLLRGPLVEAQKVRVMITEAQSIPVLTKISLYKTPGLSKKEVVQELAFAEKSLAVAKGENAYFTVKRRECSGPLEAKISIQPGTGVHGVAYQDEIYVLQFQAGESKKDLHLPTLYFAGDKTLDFYLNLTVDGQLVDQLQVQVS GT:EXON 1|1-559:0| BL:SWS:NREP 1 BL:SWS:REP 23->448|FUCO1_ARATH|1e-97|42.9|417/506| SEG 546->558|vdgqlvdqlqvqv| BL:PDB:NREP 1 BL:PDB:REP 4->449|3eypA|1e-73|38.5|434/459| RP:PDB:NREP 2 RP:PDB:REP 356->451|3cqoA|4e-06|11.5|96/293| RP:PDB:REP 476->545|3e9tC|2e-04|22.7|66/105| RP:PFM:NREP 1 RP:PFM:REP 9->318|PF01120|2e-47|46.5|269/312|Alpha_L_fucos| HM:PFM:NREP 2 HM:PFM:REP 46->319|PF01120|1.3e-32|28.8|229/347|Alpha_L_fucos| HM:PFM:REP 464->528|PF03160|0.00091|20.0|65/101|Calx-beta| GO:PFM:NREP 2 GO:PFM GO:0004560|"GO:alpha-L-fucosidase activity"|PF01120|IPR000933| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF01120|IPR000933| RP:SCP:NREP 2 RP:SCP:REP 34->312|1hl8A2|1e-34|27.2|232/335|c.1.8.11| RP:SCP:REP 326->451|1tvgA|5e-08|13.0|123/136|b.18.1.9| HM:SCP:REP 1->320|1hl9A2|5.8e-79|34.9|284/0|c.1.8.11|1/1|(Trans)glycosidases| HM:SCP:REP 327->451|1k3iA2|2.1e-10|22.4|125/0|b.18.1.1|1/1|Galactose-binding domain-like| OP:NHOMO 169 OP:NHOMOORG 85 OP:PATTERN -------------------------------------------------------------------- 1-3-1----------------------------------------23-----2----2--------1--------1------------9986-122----11---5-3-3-----------------------------11---1---1--------------------1--------------------------------------------------------------5------------------------11---------2-----------------1--11122121111-------------------------------------------3223---------------------------------------------------------------------------1---11-2-1----------------------------------------------------------------1--------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------111111111111------------------1--------------------------------------14 ----221-------------------------------------------------1----------------------------------------------1----1-----1-------------------------------------------------11-------1-----------1123-1H------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 527 STR:RPRED 94.3 SQ:SECSTR ###cccccccccHHHHHHHHHcEEEEEcccGGGGcccccccccccGGGcccccccHHHHHHHHHHTTccEEEEEEEcTTcccccccTTccccGGGccGGGGTccHHHHHHHHHHHHTcEEEEEEccccHHcTTccHHHcccHHHHHHHHHHHHHHHHcccccccccEEEcccTcccTcTTccHHHHHHHHHHHHHcTTcEEEccGGGccccccccccccccccccEEcHHHHHTGGGHHHHHTccTTccEEcccEEEEEccccccccGGGGGccHHHHHHHHHTTTTcTcEEEEEccccTTccccHHHHHHHHHHHHHHHHHHcccTTTTcEEEEccccGGGcGGGGGcc#cccccccccEEccEEEEEEEEEEEEEEEEcccccGGGGTTEEEEEEcccGGGGTTccEEEEETcEEEEEEEEEEEEEEEEEcTTcEEcccccEEEEEEEc############EcccEEEccTTcEEEEEEEEEEccccEEEEEEEEEcccccTTTccccEEEEEEcTTccEEEEEEEcccccccEE##EEEEEE############## DISOP:02AL 1-2,484-494,559-560| PSIPRED ccccccccccccHHHHHHHccEEEEEEEccccEEcccccccccccHHHccHHHccHHHHHHHHHHccccEEEEEEEEEccEEcccccccccHHHHccccccccHHHHHHHHHHHHcccEEEEEccHHHHHcHHHccccccccccEEHHHHcccccccccccccccEEEEEccccccccccccccHHHHHHHHHHHcccEEEEccccccccccccccccEEccccccccHHHccccccccccccccccccccccccEEcccccccccccccccccHHHHHHHHHHHHcccccEEEcccccccccccHHHHHHHHHHHHHHHHHccccccccccccccccccccccEEEEcccccEEEEccccccEEEEEEEcccEEEEEEEEEcccccccEEEEEEEEEEEcccEEEEEEEEEEcccEEEcccccccEEEEEEEEccccccEEEEEEEEcccccccccHHHHHHccccccccccccEEEEEEEEcccccccccEEEEcccccccccEEEEEEEEEEEcccccEEEEEEEEEEEEccccEEEEEEEEEccEEEEEEEEEEc //