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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55658.1
DDBJ      :             ABC transporter, substrate-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  53/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.94.1
:491 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   77->198 2uvjA PDBj 6e-05 26.7 %
:RPS:PDB   52->472 1a7lB PDBj 5e-15 16.7 %
:RPS:SCOP  31->489 1j1nA  c.94.1.1 * 3e-22 16.8 %
:HMM:SCOP  23->487 1y3nA1 c.94.1.1 * 5.5e-82 29.4 %
:RPS:PFM   64->270 PF01547 * SBP_bac_1 3e-10 29.3 %
:RPS:PFM   354->490 PF12010 * DUF3502 1e-30 54.5 %
:HMM:PFM   350->491 PF12010 * DUF3502 8.7e-49 43.9 139/140  
:HMM:PFM   57->345 PF01547 * SBP_bac_1 8e-11 23.3 258/314  
:BLT:SWISS 37->270 LIPO_BACSU 1e-08 30.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55658.1 GT:GENE ACF55658.1 GT:PRODUCT ABC transporter, substrate-binding protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 92394..93869 GB:FROM 92394 GB:TO 93869 GB:DIRECTION + GB:PRODUCT ABC transporter, substrate-binding protein GB:NOTE identified by match to protein family HMM PF01547 GB:PROTEIN_ID ACF55658.1 GB:DB_XREF GI:194357210 LENGTH 491 SQ:AASEQ MKNWKKYAFASASVVALAAGLAACGNLTGNSKKAADSGDKPVIKMYQIGDKPDNLDELLANANKIIEEKVGAKLDIQYLGWGDYGKKMSVITSSGENYDIAFADNYIVNAQKGAYADLTELYKKEGKDLYKALDPAYIKGNTVNGKIYAVPVAANVASSQNFAFNGTLLAKYGIDISGVTSYETLEPVLKQIKEKAPDVVPFAIGKVFIPSDNFDYPVANGLPFVIDLEGDTTKVVNRYEVPRFKEHLKTLHKFYEAGYIPKDVATSDTSFDLQQDTWFVREETVGPADYGNSLLSRVANKDIQIKPITNFIKKNQTTQVANFVISNNSKNKEKSMEILNLLNTNPELLNGLVYGPEGKNWEKIEGKENRVRVLDGYKGNTHMGGWNTGNNWILYINENVTDQQIENSKKELAEAKESPALGFIFNTDNVKSEISAIANTMQQFDTAINTGTVDPDKAIPELMEKLKSEGAYEKVLNEMQKQYDEFLKNKK GT:EXON 1|1-491:0| BL:SWS:NREP 1 BL:SWS:REP 37->270|LIPO_BACSU|1e-08|30.2|212/502| SEG 8->23|afasasvvalaaglaa| SEG 339->352|lnllntnpellngl| BL:PDB:NREP 1 BL:PDB:REP 77->198|2uvjA|6e-05|26.7|116/404| RP:PDB:NREP 1 RP:PDB:REP 52->472|1a7lB|5e-15|16.7|360/372| RP:PFM:NREP 2 RP:PFM:REP 64->270|PF01547|3e-10|29.3|191/282|SBP_bac_1| RP:PFM:REP 354->490|PF12010|1e-30|54.5|134/139|DUF3502| HM:PFM:NREP 2 HM:PFM:REP 350->491|PF12010|8.7e-49|43.9|139/140|DUF3502| HM:PFM:REP 57->345|PF01547|8e-11|23.3|258/314|SBP_bac_1| GO:PFM:NREP 2 GO:PFM GO:0005215|"GO:transporter activity"|PF01547|IPR006059| GO:PFM GO:0006810|"GO:transport"|PF01547|IPR006059| RP:SCP:NREP 1 RP:SCP:REP 31->489|1j1nA|3e-22|16.8|453/492|c.94.1.1| HM:SCP:REP 23->487|1y3nA1|5.5e-82|29.4|452/0|c.94.1.1|1/1|Periplasmic binding protein-like II| OP:NHOMO 88 OP:NHOMOORG 54 OP:PATTERN -------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------111111-M--------------------1----------11----------1-----11111--111111111112111111111111-11---111-1-------------------4515--2-------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 395 STR:RPRED 80.4 SQ:SECSTR ######################################cTTcEEEEEcTTcTTccHHHHHHHHHHHHHHHccEEEEEcEccTTHHHHHHHHTTTTccccEEEEEGGGHHHTTTccccccccHHHHTTccHTTccHHHHHHTEETTEEccEEEEEEcEEccEEEEETTTcccccTTcccccccTTHHHHHHHHHHHTcccccccTTcHHHHHHHHHHTTcEEEEEccccEEEEEEEccEcccHHHHHHHHHHHHHHHTTcccTTccHHHHHHHHHHTcccEEEEEEEcGGGHHHHHHHTccEEEEcccccTTcccccEEEEEEEEEcTTcTTHHHHHH##########HHHHTTccHHHH#########################HHHHHHccccEEccHHHHHHHTTcHHHHHHHHHHHHcEEccccT####THHHHHHHHHHHHHHHHTTcccHHHHHHHHTTcTTTTTcc################### DISOP:02AL 1-2,24-41,489-492| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEcccHHHHHHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHHccccccEEEEccHHHHHHcccEEEccHHHHHHHHHHHHHHcHHHHHHEEEccEEEEEEEcccccccEEEEEEHHHHHHccccccccccHHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHcccccEEEEEcccccEEEEEcccHHHHHHHHHHHHHHHcccccHHHcccccccHHccHHHHHcccccHHHHHHHHHHHHHccccEEEcccccccccccccccEEEEEEcccccHHHHHHHHHHHcccHHHHHHHcccccccEEEEccccccEEEEcccccccccHHHHHHccccccccccccHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcc //