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Streptococcus pneumoniae G54 (spne4)
Gene : ACF55743.1
DDBJ      :             ABC transporter, ATP-binding protein
Swiss-Prot:             

Homologs  Archaea  44/68 : Bacteria  887/915 : Eukaryota  197/199 : Viruses  1/175   --->[See Alignment]
c.37.1f.37.1
:538 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   53->517 2hydA PDBj 6e-26 24.2 %
:RPS:PDB   326->531 3b5jA PDBj 1e-23 26.5 %
:RPS:SCOP  5->292 2hydA2  f.37.1.1 * 7e-12 16.0 %
:RPS:SCOP  329->531 1b0uA  c.37.1.12 * 4e-20 21.3 %
:HMM:SCOP  1->326 2hydA2 f.37.1.1 * 4.2e-24 18.3 %
:HMM:SCOP  326->538 1pf4A1 c.37.1.12 * 2.5e-42 31.0 %
:RPS:PFM   78->270 PF00664 * ABC_membrane 2e-08 22.9 %
:RPS:PFM   405->490 PF00005 * ABC_tran 5e-09 47.3 %
:HMM:PFM   367->489 PF00005 * ABC_tran 1.2e-20 40.9 110/118  
:HMM:PFM   17->269 PF00664 * ABC_membrane 1.2e-12 16.3 252/275  
:HMM:PFM   331->376 PF03193 * DUF258 9.2e-06 26.7 45/161  
:BLT:SWISS 19->517 YWJA_BACSU 6e-29 22.6 %
:PROS 462->476|PS00211|ABC_TRANSPORTER_1
:PROS 356->369|PS00675|SIGMA54_INTERACT_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55743.1 GT:GENE ACF55743.1 GT:PRODUCT ABC transporter, ATP-binding protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 139795..141411 GB:FROM 139795 GB:TO 141411 GB:DIRECTION + GB:PRODUCT ABC transporter, ATP-binding protein GB:NOTE identified by match to protein family HMM PF00005 GB:PROTEIN_ID ACF55743.1 GB:DB_XREF GI:194357295 LENGTH 538 SQ:AASEQ MYTIIKSNIKKFSLLTIFIVAGQLLLIYAATINALVLNELIAMNLERFLKLSIYQMIVWCGIIFLDWVVKNYQVEVIQEFNLEIRNRVATDISNSTYQEFHSKSSGTYLSWLNNDVQTLNDQAFKQLFLVIKGISGTIFAVVTLNHYHWSLTVATLFSLMIMLLVPKIFASKMREVSLNLTNQNEAFLKSSETILNGFDVLASLNLLYVLPKKIKEAGILLKMVIQRKTTVETLAGAISFFLNIFFQISLVFLTGYLAIKGIVKIGTIEAIGALTGVIFTALGELGGQLSSIIGTKPIFLKLYSINPIESNKMNDIEPNEVNRDFPLYEAKNICYKYGDKEILKNLNFCFQRNEKYLILGESGSGKSTLLKLLNGFLRDYSGELRFCGDDIKKTSYLNMVSNVLYVDQKAYLFEGTIRDNILLEENYTDEEILQSLEQVGLSVKDFPNNILDYYVGDDGRLLSGGQKQKITLARGLIRNKKIVLIDEGTSAIDRRTSLAIERKILDREDLTVIIVTHAPHPELKQYFTKIYQFPKDFI GT:EXON 1|1-538:0| BL:SWS:NREP 1 BL:SWS:REP 19->517|YWJA_BACSU|6e-29|22.6|487/575| PROS 462->476|PS00211|ABC_TRANSPORTER_1|PDOC00185| PROS 356->369|PS00675|SIGMA54_INTERACT_1|PDOC00579| TM:NTM 7 TM:REGION 16->38| TM:REGION 49->71| TM:REGION 122->143| TM:REGION 150->172| TM:REGION 200->222| TM:REGION 236->258| TM:REGION 260->282| SEG 359->373|lgesgsgkstllkll| BL:PDB:NREP 1 BL:PDB:REP 53->517|2hydA|6e-26|24.2|454/578| RP:PDB:NREP 1 RP:PDB:REP 326->531|3b5jA|1e-23|26.5|204/243| RP:PFM:NREP 2 RP:PFM:REP 78->270|PF00664|2e-08|22.9|188/274|ABC_membrane| RP:PFM:REP 405->490|PF00005|5e-09|47.3|74/123|ABC_tran| HM:PFM:NREP 3 HM:PFM:REP 367->489|PF00005|1.2e-20|40.9|110/118|ABC_tran| HM:PFM:REP 17->269|PF00664|1.2e-12|16.3|252/275|ABC_membrane| HM:PFM:REP 331->376|PF03193|9.2e-06|26.7|45/161|DUF258| GO:PFM:NREP 7 GO:PFM GO:0005524|"GO:ATP binding"|PF00664|IPR001140| GO:PFM GO:0006810|"GO:transport"|PF00664|IPR001140| GO:PFM GO:0016021|"GO:integral to membrane"|PF00664|IPR001140| GO:PFM GO:0042626|"GO:ATPase activity, coupled to transmembrane movement of substances"|PF00664|IPR001140| GO:PFM GO:0055085|"GO:transmembrane transport"|PF00664|IPR001140| GO:PFM GO:0005524|"GO:ATP binding"|PF00005|IPR003439| GO:PFM GO:0016887|"GO:ATPase activity"|PF00005|IPR003439| RP:SCP:NREP 2 RP:SCP:REP 5->292|2hydA2|7e-12|16.0|287/323|f.37.1.1| RP:SCP:REP 329->531|1b0uA|4e-20|21.3|202/258|c.37.1.12| HM:SCP:REP 1->326|2hydA2|4.2e-24|18.3|311/0|f.37.1.1|1/1|ABC transporter transmembrane region| HM:SCP:REP 326->538|1pf4A1|2.5e-42|31.0|210/244|c.37.1.12|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 9643 OP:NHOMOORG 1129 OP:PATTERN --2--1-1111-1211------11411333124121212111-1-6-5-2542-331-3-121----- 4452655477733232333-3411413333336333A8771256385264455982272266226-15B83666677673EI1213226642-5358--53B753B4A5911----1223222228656A889A78455453229-DBBABB832666473659869HNQ947774755355412311D73449BBDBDCHGADEEDEGAEDDAGEFJ768BGAAEEEEFGJJCCCCBCBABBCCCBAC7579LL7IEFH8MHTDD99KKD987BGEDEBEFHIHJGFFFIGGFCHHCFF7898777797777HFFEEEEDFFFDEENJJJLLLK9KCFEKK8GFHUDAHN4FA1-MNF2329541BCEF69652125514643411785675384835555555535A-655565447A33DCC9EF8DDD585442115B46656445555555533636526111232223335336733553333421411421-2387677666587665544767777467587553235548312234453337946456412324224546636633837636311212543324431121-32472556665545212222422444543333363363679576765566555654A668--5333321122242453645666567555-65555445556545555564327A7BB3433333333333333654655555-678788888888112223322679711A38666373278662437456654432568346355646664745864444444342666C87787AC9CD123223222312222245553333--------i-C33227-422354288744812311276D689B888212 4344NF9-7222KLID9FDEIOGUHQKBA9B9CKGJ8ECDBED988GEJOPLRQEFHABBBCE9C6882894AAC9828976547B58-KU99DD9CBBGC6ALKB4DNU*HRMXTeFC9BEPEXW9gC**Y1gOgCFEAUCHsNAFFB9PB9*EPGJPEW*GYLFAeJP*hWdX4746f47638NSQsCck9EbUXa8 ------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------ STR:NPRED 519 STR:RPRED 96.5 SQ:SECSTR ##################HHHHHHHHHHHHH#HHHHHHHHTHHHHccTTcTTHHHHHHHHHHHHHHHHHTccGGGEEEGccHHHHHHHHHHHHHHcccEEEHccHHHHHHHEccccHHHHHHHHHHHHHTTccTccccEEEcccTTcccccGGGEccEEEcccHHHHcccccccccccccEEcHHHHHHHHHTTccccTTTTTTcEEEEEEEHHHHHHEEcccccTTcEEEEEEEccEccccEEEEcccccccccEEEEEccccccEEEEEEEEcccEEEEEEcccEEccEEEEcGGGTTcEEETTcccccccccccccETccccEEEEEEEEEEEcTccEEEEEEEEEEETTcEEEEEccTTccHHHHHHHHTTcccccEEEEEETTEETTTccHHHHHHHEEEEccccccTTccHHHHHcTTTTccHHHHHHHHHHHTcHHHHHTcTTGGccccTTTTcccHHHHHHHHHHHHHTTcccEEEEccccccccHHHHHHHHHHHHHHTTcEEEEEcccEcGGGGTTccEEEGGHTTTT DISOP:02AL 308-323| PSIPRED ccHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccEEEEEEEEEEEcccccccccEEEEccccEEEEEccccccHHHHHHHHHccccccccEEEEccEEHHHccHHHHHHHccEEccccccccccHHHHHHccccccHHHHHHHHHHccHHHHHccccccccccccccccccHHHHHHHHHHHHHHHcccEEEEEHHHHHccHHHHHHHHHHHHHHcccEEEEEcccccHHHHHHccEEEEEccccc //