[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Streptococcus pneumoniae G54 (spne4)
Gene : ACF55885.1
DDBJ      :             NifU family protein
Swiss-Prot:             

Homologs  Archaea  20/68 : Bacteria  447/915 : Eukaryota  42/199 : Viruses  0/175   --->[See Alignment]
d.224.1
:146 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->141 1su0B PDBj 2e-52 69.6 %
:RPS:PDB   14->105 2e5aA PDBj 3e-12 7.7 %
:RPS:SCOP  6->141 1su0B  d.224.1.2 * 5e-05 43.9 %
:HMM:SCOP  1->147 1xjsA_ d.224.1.2 * 1.3e-46 47.9 %
:RPS:PFM   9->126 PF01592 * NifU_N 1e-20 46.6 %
:HMM:PFM   10->128 PF01592 * NifU_N 2.6e-28 35.3 119/127  
:BLT:SWISS 4->144 NIFU_BACSU 2e-35 49.3 %

SeqInfo AminoSeq See neighboring genes
Links DAD Abbreviations Back to title page
GT:ID ACF55885.1 GT:GENE ACF55885.1 GT:PRODUCT NifU family protein GT:DATABASE GIB00761CH01 GT:ORG spne4 GB:ACCESSION GIB00761CH01 GB:LOCATION 766868..767308 GB:FROM 766868 GB:TO 767308 GB:DIRECTION + GB:PRODUCT NifU family protein GB:NOTE identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994 GB:PROTEIN_ID ACF55885.1 GB:DB_XREF GI:194357437 LENGTH 146 SQ:AASEQ MALSKLDSLYMAVVADHSKNPHHQGKLEDAGQISLNNPTCGDVINLSVKFDAEDRLEDIAFLNSGCTISTASASMMTDVVLGKTKQEILELATIFSEMVQGQKDERQGQLGDAAFLSGVAKFPQRIKCATLAWNALKKTIENQEKQ GT:EXON 1|1-146:0| BL:SWS:NREP 1 BL:SWS:REP 4->144|NIFU_BACSU|2e-35|49.3|140/147| BL:PDB:NREP 1 BL:PDB:REP 6->141|1su0B|2e-52|69.6|135/136| RP:PDB:NREP 1 RP:PDB:REP 14->105|2e5aA|3e-12|7.7|91/329| RP:PFM:NREP 1 RP:PFM:REP 9->126|PF01592|1e-20|46.6|118/126|NifU_N| HM:PFM:NREP 1 HM:PFM:REP 10->128|PF01592|2.6e-28|35.3|119/127|NifU_N| GO:PFM:NREP 3 GO:PFM GO:0005506|"GO:iron ion binding"|PF01592|IPR002871| GO:PFM GO:0016226|"GO:iron-sulfur cluster assembly"|PF01592|IPR002871| GO:PFM GO:0051536|"GO:iron-sulfur cluster binding"|PF01592|IPR002871| RP:SCP:NREP 1 RP:SCP:REP 6->141|1su0B|5e-05|43.9|132/136|d.224.1.2| HM:SCP:REP 1->147|1xjsA_|1.3e-46|47.9|146/0|d.224.1.2|1/1|SufE/NifU| OP:NHOMO 566 OP:NHOMOORG 509 OP:PATTERN -----------------------21111-11111---------1211111331--------------- --21111111111111111-111111111111111111111111-1111111111--1--1111111111111111111111211-------------------------------------------------1--1122---221--111-1111--------11-----------------1-1111-111111111111111111122211111111111111111111111111111111111111111--11111-1111111111111111111111111111111111111111111111111111111111111111121111111111-12211111111111-1-11111-111122111-12-1----------------------------------------------------------------------------------22-1-1----1---------------------11111-----111111111111222211-1222222121112111111---11-112--1-111111111-1111111121-111---1-11111--1--12-3111211----------------------------11--1---1---1-----11--------1--1--111-2--1-------1-----------------------------------11--------------------------------------------11111111112---------1----------------11-1-11111111111111111----------111--------111--------------111---1111--------1111111--------------------1-11111111111- -----1----------1----------------------------1----------------111----1----1-----11111-------1------------1-----------1----1-31-1-251-1141-1-11-----1--1-131-------1-1-1-111-------------------1-------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 142 STR:RPRED 97.3 SQ:SECSTR ##cTTccHHHHHHHHHHHHcHHHHTcccEEEEEEEEEEccEEEEEEEEEEEcTTEEEEEEEEccTTTccHHHHHHHHHHHTTccccccTTTccHHHHHHHHHHHHGGGGGGGGGGGGGGGGcHHHHHHHHHHHHHHHHHHTcTT## DISOP:02AL 1-3,144-147| PSIPRED ccHHHHHHHHHHHHHHHHHccccccccccccEEEEEccccccEEEEEEEEccccEEEEEEEEEccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHcc //